Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN006012000
- symbol?: —
- synonym:
- description?: peptidase M28
- peptidase M28
- glutamyl-aminopeptidase
- endo-1,4-beta-glucanase, putative
- M42 family metallopeptidase
- cellulase
- endo-1,4-beta-glucanase
- endoglucanase M
- M42 family glutamyl aminopeptidase
- M42 glutamyl aminopeptidase, cellulase
- M42 glutamyl aminopeptidase family protein
- putative aminopeptidase ysdC
- putative peptidase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6071525..6072601
- synteny block?: BlockID0047560
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2392
08BA02176:
C248_2506
11819-97:
MS7_2469 (ysdC)
6850:
RSAU_002295 (pepA2)
71193:
ST398NM01_2508
ECT-R 2:
ECTR2_2313
ED133:
SAOV_2506c
ED98:
SAAV_2522 (pepA2)
HO 5096 0412:
SAEMRSA15_23550
JH1:
SaurJH1_2531
JH9:
SaurJH9_2482
JKD6008:
SAA6008_02497 (pepA2)
JKD6159:
SAA6159_02353 (pepA2)
LGA251:
SARLGA251_22360
M013:
M013TW_2418
MRSA252:
SAR2545
MSHR1132:
SAMSHR1132_22830
MSSA476:
SAS2347
Mu3:
SAHV_2439
Mu50:
SAV2455
MW2:
MW2379
RF122:
SAB2338c
ST398:
SAPIG2508
T0131:
SAT0131_02655
TCH60:
HMPREF0772_10733 (pepA)
TW20:
SATW20_25840
USA300_TCH1516:
USA300HOU_2445 (pepA)
VC40:
SAVC_11150
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNQSVKLLKHLTDVNGIAGYEMQVKEAMRNYIEPVSDQIIEDNLGGIFGKKNAENGQYSI
N315 MNQSVKLLKHLTDVNGIAGYEMQVKEAMRNYIEPVSDQIIEDNLGGIFGKKNAENGQYSI
NCTC8325 MNQSVKLLKHLTDVNGIAGYEMQVKEAMRNYIEPVSDQIIEDNLGGIFGKKNAENGQYSI
Newman MNQSVKLLKHLTDVNGIAGYEMQVKEAMRNYIEPVSDQIIEDNLGGIFGKKNAENGQYSI
USA300_FPR3757 MNQSVKLLKHLTDVNGIAGYEMQVKEAMRNYIEPVSDQIIEDNLGGIFGKKNAENGQYSI
************************************************************
COL MISGHMDEVGFMVTKIDKHGFISFTPVGGWWNQVMLSQKVTITTDSGKEIRGIIGSKPPH
N315 MISGHMDEVGFMVTKIDKHGFISFTPVGGWWNQVMLSQKVTITTDSGKEIRGIIGSKPPH
NCTC8325 MISGHMDEVGFMVTKIDKHGFISFTPVGGWWNQVMLSQKVTITTDSGKEIRGIIGSKPPH
Newman MISGHMDEVGFMVTKIDKHGFISFTPVGGWWNQVMLSQKVTITTDSGKEIRGIIGSKPPH
USA300_FPR3757 MISGHMDEVGFMVTKIDKHGFISFTPVGGWWNQVMLSQKVTITTDSGKEIRGIIGSKPPH
************************************************************
COL VLTPEERKKPMEIKNMFIDIGVSSKEEAEEAGVEVGNMVTPYSEFEVLANDKYLTAKAFD
N315 VLTPEERKKPMEIKNMFIDIGVSSKEEAEEAGVEVGNMVTPYSEFEVLANDKYLTAKAFD
NCTC8325 VLTPEERKKPMEIKNMFIDIGVSSKEEAEEAGVEVGNMVTPYSEFEVLANDKYLTAKAFD
Newman VLTPEERKKPMEIKNMFIDIGVSSKEEAEEAGVEVGNMVTPYSEFEVLANDKYLTAKAFD
USA300_FPR3757 VLTPEERKKPMEIKNMFIDIGVSSKEEAEEAGVEVGNMVTPYSEFEVLANDKYLTAKAFD
************************************************************
COL NRYGCALAIEVLKRLKDENIGINLYSGATVQEEVGLRGAKVAANTIKPDLAIAVDVGIAY
N315 NRYGCALAVEVLKRLKDENIGINLYSGATVQEEVGLRGAKVAANTIKPDLAIAVDVGIAY
NCTC8325 NRYGCALAIEVLKRLKDENIGINLYSGATVQEEVGLRGAKVAANTIKPDLAIAVDVGIAY
Newman NRYGCALAIEVLKRLKDENIGINLYSGATVQEEVGLRGAKVAANTIKPDLAIAVDVGIAY
USA300_FPR3757 NRYGCALAIEVLKRLKDENIGINLYSGATVQEEVGLRGAKVAANTIKPDLAIAVDVGIAY
********:***************************************************
COL DTPGMSGQTSDSKLGGGPVVIMMDATSIAHQGLRKHIKDVAKEHNIEVQWDTTPGGGTDA
N315 DTPGMSGQTSDSKLGGGPVVIMMDATSIAHQGLRKHIKDVAKEHNIEVQWDTTPGGGTDA
NCTC8325 DTPGMSGQTSDSKLGGGPVVIMMDATSIAHQGLRKHIKDVAKEHNIEVQWDTTPGGGTDA
Newman DTPGMSGQTSDSKLGGGPVVIMMDATSIAHQGLRKHIKDVAKEHNIEVQWDTTPGGGTDA
USA300_FPR3757 DTPGMSGQTSDSKLGGGPVVIMMDATSIAHQGLRKHIKDVAKEHNIEVQWDTTPGGGTDA
************************************************************
COL GSIHVANEGIPTMTIGVTLRYMHSNVSVLNVDDYENSIRLVTEIVRSLNDESYKNIMW
N315 GSIHVANEGIPTMTIGVTLRYMHSNVSVLNVDDYENSIRLVTEIVRSLNDESYKNIMW
NCTC8325 GSIHVANEGIPTMTIGVTLRYMHSNVSVLNVDDYENSIRLVTEIVRSLNDESYKNIMW
Newman GSIHVANEGIPTMTIGVTLRYMHSNVSVLNVDDYENSIRLVTEIVRSLNDESYKNIMW
USA300_FPR3757 GSIHVANEGIPTMTIGVTLRYMHSNVSVLNVDDYENSIRLVTEIVRSLNDESYKNIMW
**********************************************************