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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006038000
- symbol?: —
- synonym:
- description?: carboxymuconolactone decarboxylase family protein
- carboxymuconolactone decarboxylase family protein
- alkylhydroperoxidase
- AhpD family alkylhydroperoxidase
- Alkylhydroperoxidase like protein, AhpD family
- putative carboxymuconolactone decarboxylase
- transposase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6093661..6094083
- synteny block?: BlockID0047820
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2411
08BA02176:
C248_2524
11819-97:
MS7_2487
6850:
RSAU_002312
71193:
ST398NM01_2524
ECT-R 2:
ECTR2_2331
ED133:
SAOV_2524c
ED98:
SAAV_2540
HO 5096 0412:
SAEMRSA15_23720
JH1:
SaurJH1_2551
JH9:
SaurJH9_2501
JKD6008:
SAA6008_02515
JKD6159:
SAA6159_02371
LGA251:
SARLGA251_22540
M013:
M013TW_2434
MRSA252:
SAR2561
MSHR1132:
SAMSHR1132_22990
MSSA476:
SAS2365
Mu3:
SAHV_2458
Mu50:
SAV2474
MW2:
MW2398
RF122:
SAB2357c
ST398:
SAPIG2524
T0131:
SAT0131_02673 (rpsB)
TCH60:
HMPREF0772_10715
TW20:
SATW20_26020
USA300_TCH1516:
USA300HOU_2465
VC40:
SAVC_11245
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MPYNYKKQNGELMSVMSQGEKFIHQSPVNDELSALIKLLISKINGCHYCVDIHKKELKEL
N315 MPYNYKKQNGELMSVMSQGEKFIHQSPVNDELSALIKLLISKINGCHYCVDIHKKELKEL
NCTC8325 MPYNYKKQNGELMSVMSQGEKFIHQSPVNDELSALIKLLISKINGCHYCVDIHKKELKEL
Newman MPYNYKKQNGELMSVMSQGEKFIHQSPVNDELSALIKLLISKINGCHYCVDIHKKELKEL
USA300_FPR3757 MPYNYKKQNGELMSVMSQGEKFIHQSPVNDELSALIKLLISKINGCHYCVDIHKKELKEL
************************************************************
COL GVTQMKIDEVLSFRHLDLFTDQEKVTLEFAEMLNSIKDFKKFEIIDRLKSFYDEEQIIDL
N315 GVTQMKIDEVLSFRHLDLFTDQEKVTLEFAEMLNSIKDFKKFEIIDRLKSFYDEEQIIDL
NCTC8325 GVTQMKIDEVLSFRHLDLFTDQEKVTLEFAEMLNSIKDFKKFEIIDRLKSFYDEEQIIDL
Newman GVTQMKIDEVLSFRHLDLFTDQEKVTLEFAEMLNSIKDFKKFEIIDRLKSFYDEEQIIDL
USA300_FPR3757 GVTQMKIDEVLSFRHLDLFTDQEKVTLEFAEMLNSIKDFKKFEIIDRLKSFYDEEQIIDL
************************************************************
COL VFVVNQINGWNRLNIISDRL
N315 VFVVNQINGWNRLNIISDRL
NCTC8325 VFVVNQINGWNRLNIISDRL
Newman VFVVNQINGWNRLNIISDRL
USA300_FPR3757 VFVVNQINGWNRLNIISDRL
********************