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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006136000
- symbol?: —
- synonym:
- description?: DUF2188 domain-containing protein
- strand?: -
- coordinates?: 6210755..6211171
- synteny block?: BlockID0048680
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2446
08BA02176:
C248_2562
11819-97:
MS7_2513
6850:
RSAU_002347
71193:
ST398NM01_2560
ECT-R 2:
ECTR2_2362
ED133:
—
ED98:
SAAV_2575
HO 5096 0412:
SAEMRSA15_24060
JH1:
SaurJH1_2585
JH9:
SaurJH9_2533
JKD6008:
SAA6008_02545
JKD6159:
SAA6159_02404
LGA251:
SARLGA251_22830
M013:
M013TW_2475
MRSA252:
SAR2587
MSHR1132:
SAMSHR1132_23280
MSSA476:
SAS2395
Mu3:
SAHV_2494
Mu50:
SAV2510
MW2:
MW2428
RF122:
SAB2382c
ST398:
SAPIG2560
T0131:
SAT0131_02709
TCH60:
HMPREF0772_10687
TW20:
SATW20_26290
USA300_TCH1516:
USA300HOU_2497
VC40:
SAVC_11415
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MFNMFHFIIMVVYNMNYNILEVKEMPFTMKGYPEKWKEFEVIKRQKAIEIANAMLKEGYL
N315 MFNMFHFIIMVVYNMNYNILEVKEMPFTMKGYPEKWKEFEVIKRQKAIEIANAMLKEGYL
NCTC8325 ------------------------MPFTMKGYPEKWKEFEVIKRQKAIEIANAMLKEGYL
Newman MFNMFHFIIMVVYNMNYNILEVKEMPFTMKGYPEKWKEFEVIKRQKAIEIANAMLKEGYL
USA300_FPR3757 MFNMFHFIIMVVYNMNYNILEVKEMPFTMKGYPEKWKEFEVIKRQKAIEIANAMLKEGYL
************************************
COL EKDVVPIAAKKAKDWYRALSKEEIKALEEENFVQFHTATMEKTEVDSEYATTDNEEHIQE
N315 EKDVVPIAAKKAKDWYRALSKEEIKALEEENFVQFHTATMEKAEVDSEYATTDNEEHIQE
NCTC8325 EKDVVPIAAKKAKDWYRALSKEEIKALEEENFVQFHTATMEKTEVDSEYATTDNEEHIQE
Newman EKDVVPIAAKKAKDWYRALSKEEIKALEEENFVQFHTATMEKTEVDSEYATTDNEEHIQE
USA300_FPR3757 EKDVVPIAAKKAKDWYRALSKEEIKALEEENFVQFHTATMEKTEVDSEYATTDNEEHIQE
******************************************:*****************
COL QSNQDKSYFDSESIGNQSGGVRQREPLMDGPHPKVVESFKDV
N315 QSNQDKSYFDSESIGNQSGGVRQREPLMDGAHPKVVESFKDV
NCTC8325 QSNQDKSYFDSESIGNQSGGVRQREPLMDGPHPKVVESFKDV
Newman QSNQDKSYFDSESIGNQSGGVRQREPLMDGPHPKVVESFKDV
USA300_FPR3757 QSNQDKSYFDSESIGNQSGGVRQREPLMDGPHPKVVESFKDV
******************************.***********