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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006148000
- symbol?: —
- synonym:
- description?: MFS transporter
- MFS transporter
- drug transporter
- multidrug resistance transporter protein
- Major Facilitator Superfamily protein
- Bicyclomycin resistance protein
- drug transporter, putative
- major facilitator transporter
- MFS family major facilitator transporter
- multidrug-efflux transporter
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6220011..6221320
- synteny block?: BlockID0048790
- occurrence?: in 55% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
—
08BA02176:
C248_2568 (yvmA)
11819-97:
MS7_2517
6850:
—
71193:
ST398NM01_2564
ECT-R 2:
—
ED133:
SAOV_2556c
ED98:
—
HO 5096 0412:
SAEMRSA15_24100
JH1:
—
JH9:
—
JKD6008:
SAA6008_02549
JKD6159:
SAA6159_02408
LGA251:
SARLGA251_22870
M013:
—
MRSA252:
—
MSHR1132:
SAMSHR1132_23330
MSSA476:
—
Mu3:
—
Mu50:
—
MW2:
—
RF122:
—
ST398:
SAPIG2564
T0131:
SAT0131_02714
TCH60:
—
TW20:
SATW20_26330
USA300_TCH1516:
USA300HOU_2501
VC40:
SAVC_11435
⊟Genome Viewer[edit | edit source]
| COL | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MINSNIRLYILGFLAFFASLIQNIYTPIIPRLYDDFQVPLFWINATVGGFIFIVAVMQIV
NCTC8325 MINSNIRLYILGFLAFFASLIQNIYTPIIPRLYDDFQVPLFWINATVGGFIFIVAVMQIV
Newman MINSNIRLYILGFLAFFASLIQNIYTPIIPRLYDDFQVPLFWINATVGGFIFIVAVMQIV
USA300_FPR3757 MINSNIRLYILGFLAFFASLIQNIYTPIIPRLYDDFQVPLFWINATVGGFIFIVAVMQIV
************************************************************
COL LGRSIDSRDSKKVLLTGLGIVIISSFICAVTHNFILFAISRLFQAIGCGIIPLVTLTLLA
NCTC8325 LGRSIDSRDSKKVLLTGLGIVIISSFICAVTHNFILFAISRLFQAIGCGIIPLVTLTLLA
Newman LGRSIDSRDSKKVLLTGLGIVIISSFICAVTHNFILFAISRLFQAIGCGIIPLVTLTLLA
USA300_FPR3757 LGRSIDSRDSKKVLLTGLGIVIISSFICAVTHNFILFAISRLFQAIGCGIIPLVTLTLLA
************************************************************
COL KLSTDNGRAQAMANYQIFLSCAPALAPILGSTLGARWDYIGIFSFLLVISIVLFLIIFFI
NCTC8325 KLSTDNGRAQAMANYQIFLSCAPALAPILGSTLGARWDYIGIFSFLLVISIVLFLIIFFI
Newman KLSTDNGRAQAMANYQIFLSCAPALAPILGSTLGARWDYIGIFSFLLVISIVLFLIIFFI
USA300_FPR3757 KLSTDNGRAQAMANYQIFLSCAPALAPILGSTLGARWDYIGIFSFLLVISIVLFLIIFFI
************************************************************
COL DIPNVEKGIVKLTEKIEEKYLTDKVFITLVTLGFLIFFTYFSILVYLPTLLNNTYDIGVG
NCTC8325 DIPNVEKGIVKLTEKIEEKYLTDKVFITLVTLGFLIFFTYFSILVYLPTLLNNTYDIGVG
Newman DIPNVEKGIVKLTEKIEEKYLTDKVFITLVTLGFLIFFTYFSILVYLPTLLNNTYDIGVG
USA300_FPR3757 DIPNVEKGIVKLTEKIEEKYLTDKVFITLVTLGFLIFFTYFSILVYLPTLLNNTYDIGVG
************************************************************
COL ISGVLFLPITVSVILGSLFYKRFSKKYNEIMILRVTITGFAIFTLLFGWLNESNVIILSV
NCTC8325 ISGVLFLPITVSVILGSLFYKRFSKKYNEIMILRVTITGFAIFTLLFGWLNESNVIILSV
Newman ISGVLFLPITVSVILGSLFYKRFSKKYNEIMILRVTITGFAIFTLLFGWLNESNVIILSV
USA300_FPR3757 ISGVLFLPITVSVILGSLFYKRFSKKYNEIMILRVTITGFAIFTLLFGWLNESNVIILSV
************************************************************
COL IIFILGTCVGIVPALLSTIISKRFEHIKGKVLGVFNFVRYIGMTVGALLIGIISQPLVAF
NCTC8325 IIFILGTCVGIVPALLSTIISKRFEHIKGKVLGVFNFVRYIGMTVGALLIGIISQPLVAF
Newman IIFILGTCVGIVPALLSTIISKRFEHIKGKVLGVFNFVRYIGMTVGALLIGIISQPLVAF
USA300_FPR3757 IIFILGTCVGIVPALLSTIISKRFEHIKGKVLGVFNFVRYIGMTVGALLIGIISQPLVAF
************************************************************
COL YFTTITIMLIVIFLYIKIVDFQLKYAK
NCTC8325 YFTTITIMLIVIFLYIKIVDFQLKYAK
Newman YFTTITIMLIVIFLYIKIVDFQLKYAK
USA300_FPR3757 YFTTITIMLIVIFLYIKIVDFQLKYAK
***************************