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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006163000
- symbol?: mhqE
- synonym:
- description?: ring-cleaving dioxygenase
- ring-cleaving dioxygenase
- dioxygenase, putative
- glyoxylase family protein
- glyoxalase/bleomycin resistance protein/dioxygenase
- glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein
- Glyoxalase family protein
- glyoxylase
- lactoylglutatione lyase
- pseudogene
- putative dioxygenase
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6235700..6236572
- synteny block?: BlockID0048880
- occurrence?: in 100% of 33 strains
Suggest updating pan-symbol to "mhqE" and description to "methylhydroquinone degradation ring-cleaving dioxygenase" to harmonize with PMID 31310152
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2455
08BA02176:
C248_2577
11819-97:
MS7_2524
6850:
RSAU_002360
71193:
ST398NM01_2571
ECT-R 2:
ECTR2_2371
ED133:
SAOV_2563c
ED98:
SAAV_2584
HO 5096 0412:
SAEMRSA15_24170
JH1:
SaurJH1_2594
JH9:
SaurJH9_2542
JKD6008:
SAA6008_02557
JKD6159:
SAA6159_02415
LGA251:
SARLGA251_22940
M013:
M013TW_2490
MRSA252:
SAR2599
MSHR1132:
SAMSHR1132_23400
MSSA476:
SAS2404
Mu3:
SAHV_2503
Mu50:
SAV2519
MW2:
MW2439
RF122:
SAB2393c
ST398:
SAPIG2571
T0131:
SAT0131_02721 (cinA)
TCH60:
HMPREF0772_10674
TW20:
SATW20_26400
USA300_TCH1516:
USA300HOU_2509
VC40:
SAVC_11470
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MINNHELLGIHHVTAMTDDAERNYKFFTEVLGMRLVKKTVNQDDIYTYHTFFADDVGSAG
N315 MINNHELLGIHHVTAMTDDAERNYKFFTEVLGMRLVKKTVNQDDIYTYHTFFADDVGSAG
NCTC8325 --------------------------------MRLVKKTVNQDDIYTYHTFFADDVGSAG
Newman MINNHELLGIHHVTAMTDDAERNYKFFTEVLGMRLVKKTVNQDDIYTYHTFFADDVGSAG
USA300_FPR3757 --------------------------------MRLVKKTVNQDDIYTYHTFFADDVGSAG
****************************
COL TDMTFFDFPNITKGQAGTNSITRPSFRVPNDDALTYYEQRFDEFGVKHEGIQELFGKKVL
N315 TDMTFFDFPNITKGQAGTNSITRPSFRVPNDDALMYYEQRFDEFGVKHEGIQELFGKKVL
NCTC8325 TDMTFFDFPNITKGQAGTNSITRPSFRVPNDDALTYYEQRFDEFGVKHEGIQELFGKKVL
Newman TDMTFFDFPNITKGQAGTNSITRPSFRVPNDDALTYYEQRFDEFGVKHEGIQELFGKKVL
USA300_FPR3757 TDMTFFDFPNITKGQAGTNSITRPSFRVPNDDALTYYEQRFDEFGVKHEGIQELFGKKVL
********************************** *************************
COL PFEEVDGQVYQLISDELNEGVAPGVPWKNGPVPVDKAIYGLGPIEIKVSYFDDFKNILET
N315 PFEEVDGQVYQLISDELNDGVAPGVPWKNGPVPVDKAIYGLGPIEIKVSYFDDFKNILET
NCTC8325 PFEEVDGQVYQLISDELNEGVAPGVPWKNGPVPVDKAIYGLGPIEIKVSYFDDFKNILET
Newman PFEEVDGQVYQLISDELNEGVAPGVPWKNGPVPVDKAIYGLGPIEIKVSYFDDFKNILET
USA300_FPR3757 PFEEVDGQVYQLISDELNEGVAPGVPWKNGPVPVDKAIYGLGPIEIKVSYFDDFKNILET
******************:*****************************************
COL VYGMTTIAHEDNVALLEVGEGGNGGQVILIKDDKGPAARQGYGEVHHVSFRVKDHDAIEA
N315 VYGMTTIAHEDNVALLEVGEGGNGGQVILIKDDKGPAARQGYGEVHHVSFRVKDHDAIEA
NCTC8325 VYGMTTIAHEDNVALLEVGEGGNGGQVILIKDDKGPAARQGYGEVHHVSFRVKDHDAIEA
Newman VYGMTTIAHEDNVALLEVGEGGNGGQVILIKDDKGPAARQGYGEVHHVSFRVKDHDAIEA
USA300_FPR3757 VYGMTTIAHEDNVALLEVGEGGNGGQVILIKDDKGPAARQGYGEVHHVSFRVKDHDAIEA
************************************************************
COL WATKYKEVGINNSGIVNRFYFEALYARVGHILIEISTDGPGFMEDEPYETLGEGLSLPPF
N315 WATKYKEVGINNSGIVNRFYFEALYARVGHILIEISTDGPGFMEDEPYETLGEGLSLPPF
NCTC8325 WATKYKEVGINNSGIVNRFYFEALYARVGHILIEISTDGPGFMEDEPYETLGEGLSLPPF
Newman WATKYKEVGINNSGIVNRFYFEALYARVGHILIEISTDGPGFMEDEPYETLGEGLSLPPF
USA300_FPR3757 WATKYKEVGINNSGIVNRFYFEALYARVGHILIEISTDGPGFMEDEPYETLGEGLSLPPF
************************************************************
COL LENKREYIESEVRPFNTKRQHG
N315 LENKREYIESEIRPFNTKR---
NCTC8325 LENKREYIESEVRPFNTKRQHG
Newman LENKREYIESEVRPFNTKRQHG
USA300_FPR3757 LENKREYIESEVRPFNTKRQHG
***********:*******