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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006255000
- symbol?: —
- synonym:
- description?: amidohydrolase
- amidohydrolase
- amidohydrolase family protein
- 5-carboxyvanillic acid decarboxylase
- amidohydrolase 2
- o-pyrocatechuate decarboxylase
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 6310791..6311816
- synteny block?: BlockID0049780
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2518
08BA02176:
C248_2639
11819-97:
MS7_2586
6850:
RSAU_002420
71193:
ST398NM01_2630
ECT-R 2:
ECTR2_2434
ED133:
SAOV_2625
ED98:
SAAV_2646
HO 5096 0412:
SAEMRSA15_24820
JH1:
SaurJH1_2656
JH9:
SaurJH9_2602
JKD6008:
SAA6008_02618
JKD6159:
SAA6159_02477
LGA251:
SARLGA251_23540
M013:
M013TW_2554
MRSA252:
SAR2660
MSHR1132:
SAMSHR1132_23950
MSSA476:
SAS2466
Mu3:
SAHV_2564
Mu50:
SAV2580
MW2:
MW2500
RF122:
SAB2454
ST398:
SAPIG2630
T0131:
SAT0131_02792 (hisI)
TCH60:
HMPREF0772_10611
TW20:
SATW20_27000
USA300_TCH1516:
USA300HOU_2574
VC40:
SAVC_11775
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MKSITFEEHYVIEDIQKETMNAISADPKGVPMKVMLEGLEKKTGFTNADELSHHDERIQF
N315 MKSITFEEHYVIEDIQKETMNAISADPKGVPMKVMLEGLEKKTGFTNADELSHHDERIQF
NCTC8325 MKSITFEEHYVIEDIQKETMNAISADPKGVPMKVMLEGLEKKTGFTNADELSHHDERIQF
Newman MKSITFEEHYVIEDIQKETMNAISADPKGVPMKVMLEGLEKKTGFTNADELSHHDERIQF
USA300_FPR3757 MKSITFEEHYVIEDIQKETMNAISADPKGVPMKVMLEGLEKKTGFTNADELSHHDERIQF
************************************************************
COL MNNQDVQIQVLSYGNGSPSNLVGQKAIELCQKANDQLANYIAQYPNRFVGFATLPINEPE
N315 MNNQDVQIQVLSYGNGSPSNLVGQKAIELCQKANDQLANYIAQYPNRFVGFATLPINEPE
NCTC8325 MNNQDVQIQVLSYGNGSPSNLVGQKAIELCQKANDQLANYIAQYPNRFVGFATLPINEPE
Newman MNNQDVQIQVLSYGNGSPSNLVGQKAIELCQKANDQLANYIAQYPNRFVGFATLPINEPE
USA300_FPR3757 MNNQDVQIQVLSYGNGSPSNLVGQKAIELCQKANDQLANYIAQYPNRFVGFATLPINEPE
************************************************************
COL AAAREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPIYLHPAPVNSDIY
N315 AAAREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPIYLHPAPVNSDIY
NCTC8325 AAAREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPIYLHPAPVNSDIY
Newman AAAREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPIYLHPAPVNSDIY
USA300_FPR3757 AAAREFERCINDLGFKGALIMGRAQDGFLDQDKYDIIFKTAENLDVPIYLHPAPVNSDIY
************************************************************
COL QSYYKGNYPEVTAATFACFGYGWHIDVGIHAIHLVLSGIFDRYPKLNMIIGHWGEFIPFF
N315 QSYYKGNYPEVTAATFACFGYGWHIDVGIHAIHLVLSGIFDRYPKLNMIIGHWGEFIPFF
NCTC8325 QSYYKGNYPEVTAATFACFGYGWHIDVGIHTIHLVLSGIFDRYPKLNMIIGHWGEFIPFF
Newman QSYYKGNYPEVTAATFACFGYGWHIDVGIHAIHLVLSGIFDRYPKLNMIIGHWGEFIPFF
USA300_FPR3757 QSYYKGNYPEVTAATFACFGYGWHIDVGIHAIHLVLSGIFDRYPKLNMIIGHWGEFIPFF
******************************:*****************************
COL LERMDEALFTEHLNHPVSYYFKNNFYITPSGMLTKPQFDLVKKEVGIDRILYAADYPYIE
N315 LERMDEALFAEHLNHSVSYYFKNSFYITPSGMLTKPQFDLVKKEVGIDRILYAADYPYIE
NCTC8325 LERMDEALFAEHLNHPVSYYFKNNFYITPSGMLTKPQFDLVKKEVGIDRILYAADYPYIE
Newman LERMDEALFTEHLNHPVSYYFKNNFYITPSGMLTKPQFDLVKKEVGIDRILYAADYPYIE
USA300_FPR3757 LERMDEALFAEHLNHPVSYYFKNNFYITPSGMLTKPQFDLVKKEVGIDRILYAADYPYIE
*********:*****.*******.************************************
COL PEKLGVFLDELGLTDEEKEKISYTNGAKLLGLSPNN
N315 PEKLGVFLDELGLTDEEKEKISYTNGAKLLGLSSNN
NCTC8325 PEKLGVFLDELGLTDEEKEKISYTNGAKLLGLSPNN
Newman PEKLGVFLDELGLTDEEKEKISYTNGAKLLGLSPNN
USA300_FPR3757 PEKLGVFLDELGLTDEEKEKISYTNGAKLLGLSPNN
*********************************.**