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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006379000
- symbol?: sasF
- synonym:
- description?: cell-wall-anchored protein SasF
- cell-wall-anchored protein SasF
- LPXTG cell wall surface anchor family protein
- putative surface anchored protein
- putative surface anchored protein SasF
- surface anchored protein
- cell wall anchor domain-containing protein
- cell-wall-anchored protein SasF (LPXAG motif)
- LPXTG family cell wall surface anchor protein
- LPXTG-motif cell wall anchor domain-containing protein
- putative cell-wall-anchored protein SasF(LPXAG motif)
- putative LPXAG surface protein
- serine-rich glycoprotein adhesin SraP
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6419579..6421147
- synteny block?: BlockID0050870
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2585 (sasF)
08BA02176:
C248_2714 (sasF)
11819-97:
MS7_2651 (sasF)
6850:
RSAU_002489 (sasF)
71193:
ST398NM01_2696
ECT-R 2:
ECTR2_2500
ED133:
SAOV_2697c
ED98:
SAAV_2716
HO 5096 0412:
SAEMRSA15_25510 (sasF)
JH1:
SaurJH1_2726
JH9:
SaurJH9_2670
JKD6008:
SAA6008_02705 (sasF)
JKD6159:
SAA6159_02542 (sasF)
LGA251:
SARLGA251_24180 (sasF)
M013:
M013TW_2627
MRSA252:
SAR2725 (sasF)
MSHR1132:
SAMSHR1132_24700
MSSA476:
SAS2532
Mu3:
SAHV_2630
Mu50:
SAV2646
MW2:
MW2567
RF122:
SAB2521c
ST398:
SAPIG2696
T0131:
SAT0131_02914
TCH60:
HMPREF0772_10541 (sraP)
TW20:
SATW20_27840 (sasF)
USA300_TCH1516:
USA300HOU_2646 (sasF)
VC40:
SAVC_12110
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MAKYRGKPFQLYVKLSCSTMMATSIILTNILPYDAQAASEKDTEITKEILSKQDLLDKVD
N315 MAKYRGKPFQLYVKLSCSTMMASSIILTNILPYDAQAASEKDTEISKEILSKQDLLDKVD
NCTC8325 MAKYRGKPFQLYVKLSCSTMMATSIILTNILPYDAQAASEKDTEITKEILSKQDLLDKVD
Newman MAKYRGKPFQLYVKLSCSTMMATSIILTNILPYDAQAASEKDTEITKEILSKQDLLDKVD
USA300_FPR3757 MAKYRGKPFQLYVKLSCSTMMATSIILTNILPYDAQAASEKDTEITKEILSKQDLLDKVD
**********************:**********************:**************
COL KAIRQIEQLKQLSASSKEHYKAQLNEAKTASQIDEIIKRANELDSKDNKSSHTEMNGQSD
N315 KAIRQIEQLKQLSASSKAHYKAQLNEAKTASQIDEIIKRANELDSKENKSSHTEMNGQSD
NCTC8325 KAIRQIEQLKQLSASSKEHYKAQLNEAKTASQIDEIIKRANELDSKDNKSSHTEMNGQSD
Newman KAIRQIEQLKQLSASSKEHYKAQLNEAKTASQIDEIIKRANELDSKDNKSSHTEMNGQSD
USA300_FPR3757 KAIRQIEQLKQLSASSKEHYKAQLNEAKTASQIDEIIKRANELDSKDNKSSHTEMNGQSD
***************** ****************************:*************
COL IDSKLDQLLKDLNEVSSNVDRGQQSGEDDLNAMKNDMSQTATTKHGEKDDKNDEAMVNKA
N315 IDSKLDQLLKDLNEVSSNVDRGQQSGEDDLNAMKNDMSQTATTKYGEKDDKNDEAMVNKA
NCTC8325 IDSKLDQLLKDLNEVSSNVDRGQQSGEDDLNAMKNDMSQTATTKHGEKDDKNDEAMVNKA
Newman IDSKLDQLLKDLNEVSSNVDRGQQSGEDDLNAMKNDMSQTATTKHGEKDDKNDEAMVNKG
USA300_FPR3757 IDSKLDQLLKDLNEVSSNVDRGQQSGEDDLNAMKNDMSQTATTKHGEKDDKNDEAMVNKA
********************************************:**************.
COL LEDLDHLNQQIHKSKDASKDTSEDPAVSTTDNNHEVAKTPNNDGSGHVVLNKFLSNEENQ
N315 LEDLDHLNQQIHKSKDALKDASKDPAVSTTDSNHEVAKTPNNDGSGHVVLNKFLSNEENQ
NCTC8325 LEDLDHLNQQIHKSKDASKDTSEDPAVSTTDNNHEVAKTPNNDGSGHVVLNKFLSNEENQ
Newman LEDLDHLNQQIHKSKDASKDTSEDPAVSTTDNNHEVAKTPNNDGSGHVVLNKFLSNEENQ
USA300_FPR3757 LEDLDHLNQQIHKSKDASKDTSEDPAVSTTDNNHEVAKTPNNDGSGHVVLNKFLSNEENQ
***************** **:*:********.****************************
COL SHSNRLTDKLQGSDKINHAMIEKLAKSNASTQHYTYHKLNTLQSLDQRIANTQLPKNQKS
N315 SHSNQLTDKLQGSDKINHAMIEKLAKSNASTQHYTYHKLNTLQSLDQRIANTQLPKNQKS
NCTC8325 SHSNRLTDKLQGSDKINHAMIEKLAKSNASTQHYTYHKLNTLQSLDQRIANTQLPKNQKS
Newman SHSNRLTDKLQGSDKINHAMIEKLAKSNASTQHYTYHKLNTLQSLDQRIANTQLPKNQKS
USA300_FPR3757 SHSNRLTDKLQGSDKINHAMIEKLAKSNASTQHYTYHKLNTLQSLDQRIANTQLPKNQKS
****:*******************************************************
COL DLMSEVNKTKERIKSQRNIILEELARTDDKKYATQSILESIFNKDEAVKILKDIRVDGKT
N315 DLMSEVNKTKERIKSQRNIILEELARTDDKKYATQSILESIFNKDEADKILKDIRVDGKT
NCTC8325 DLMSEVNKTKERIKSQRNIILEELARTDDKKYATQSILESIFNKDEAVKILKDIRVDGKT
Newman DLMSEVNKTKERIKSQRNIILEELARTDDKKYATQSILESIFNKDEAVKILKDIRVDGKT
USA300_FPR3757 DLMSEVNKTKERIKSQRNIILEELARTDDKKYATQSILESIFNKDEAVKILKDIRVDGKT
*********************************************** ************
COL DQQIADQITRHIDQLSLTTSDDLLTSLIDQSQDKSLLISQILQTKLGKAEADKLAKDWTN
N315 DQQIADQITRHIDQLSLTTSDDLLTSLIDQSQDKSLLISQILQTKLGKAEADKLAKDWTN
NCTC8325 DQQIADQITRHIDQLSLTTSDDLLTSLIDQSQDKSLLISQILQTKLGKAEADKLAKDWTN
Newman DQQIADQITRHIDQLSLTTSDDLLTSLIDQSQDKSLLISQILQTKLGKAEADKLAKDWTN
USA300_FPR3757 DQQIADQITRHIDQLSLTTSDDLLTSLIDQSQDKSLLISQILQTKLGKAEADKLAKDWTN
************************************************************
COL KGLSNRQIVDQLKKHFASTGDTSSDDILKAILNNAKDKKQAIETILATRIERQKAKLLAD
N315 KGLSNRQIVDQLKKHFASTGDTSSDDILKAILNNAKDKKQAIETILATRIERQKAKLLAD
NCTC8325 KGLSNRQIVDQLKKHFASTGDTSSDDILKAILNNAKDKKQAIETILATRIERQKAKLLAD
Newman KGLSNRQIVDQLKKHFASTGDTSSDDILKAILNNAKDKKQAIETILATRIERQKAKLLAD
USA300_FPR3757 KGLSNRQIVDQLKKHFASTGDTSSDDILKAILNNAKDKKQAIETILATRIERQKAKLLAD
************************************************************
COL LITKIETDQNKIFNLVKSALNGKADDLLNLQKRLNQTKKDIDYILSPIVNRPSLLDRLNK
N315 LITKIETDQNKIFNLVKSALNGKADDLLNLQKRLNQTKKDIDYILSPIVNRPSLLDRLNK
NCTC8325 LITKIETDQNKIFNLVKSALNGKADDLLNLQKRLNQTKKDIDYILSPIVNRPSLLDRLNK
Newman LITKIETDQNKIFNLVKSALNGKADDLLNLQKRLNQTKKDIDYILSPIVNRPSLLDRLNK
USA300_FPR3757 LITKIETDQNKIFNLVKSALNGKADDLLNLQKRLNQTKKDIDYILSPIVNRPSLLDRLNK
************************************************************
COL NGKTTDLNKLANLMNQGSDLLDSIPDIPTPKPEKTLTLGKGNGLLSGLLNADGNVSLPKA
N315 NGKTTDLNKLANLMNQGSNLLDSIPDIPTPKPEKTLTLGKGNGLLSGLLNADGNVSLPKA
NCTC8325 NGKTTDLNKLANLMNQGSDLLDSIPDIPTPKPEKTLTLGKGNGLLSGLLNADGNVSLPKA
Newman NGKTTDLNKLANLMNQGSDLLDSIPDIPTPKPEKTLTLGKGNGLLSGLLNADGNVSLPKA
USA300_FPR3757 NGKTTDLNKLANLMNQGSDLLDSIPDIPTPKPEKTLTLGKGNGLLSGLLNADGNVSLPKA
******************:*****************************************
COL GETIKEHWLPISVIVGAMGVLMIWLSRRNKLKNKA
N315 GETIKEHWLPISVIVGAMGVLMIWLSRRNKLKNKA
NCTC8325 GETIKEHWLPISVIVGAMGVLMIWLSRRNKLKNKA
Newman GETIKEHWLPISVIVGAMGVLMIWLSRRNKLKNKA
USA300_FPR3757 GETIKEHWLPISVIVGAMGVLMIWLSRRNKLKNKA
***********************************