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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006403000
- symbol?: —
- synonym:
- description?: orf1
- strand?: +
- coordinates?: 6454866..6455320
- synteny block?: BlockID0051100
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2597
08BA02176:
C248_2728
11819-97:
MS7_2663
6850:
RSAU_002503
71193:
ST398NM01_2710
ECT-R 2:
ECTR2_2512
ED133:
SAOV_2710
ED98:
SAAV_2730
HO 5096 0412:
SAEMRSA15_25650
JH1:
SaurJH1_2739
JH9:
SaurJH9_2682
JKD6008:
SAA6008_02718
JKD6159:
SAA6159_02554
LGA251:
SARLGA251_24320
M013:
M013TW_2641
MRSA252:
SAR2739
MSHR1132:
SAMSHR1132_24860
MSSA476:
SAS2544
Mu3:
SAHV_2642
Mu50:
SAV2658
MW2:
MW2578
RF122:
SAB2533
ST398:
SAPIG2710
T0131:
SAT0131_02937
TCH60:
HMPREF0772_10528
TW20:
SATW20_27960
USA300_TCH1516:
USA300HOU_2658
VC40:
SAVC_12170
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MILRYATNLKLAKELYQASKPKLQEDKGMIELFEHTFGLQKELVKYVGIAEATTAALYSA
N315 MILRYATNLKLAKELYQASKPKLQEDKGMIELFEHTFGLQKELVKYVGIAEATTAALYSA
NCTC8325 MILRYATNLKLAKELYQASKPKLQEDKGMIELFEHTFGLQKELVKYVGIAEATTAALYSA
Newman MILRYATNLKLAKELYQASKPKLQEDKGMIELFEHTFGLQKELVKYVGIAEATTAALYSA
USA300_FPR3757 MILRYATNLKLAKELYQASKPKLQEDKGMIELFEHTFGLQKELVKYVGIAEATTAALYSA
************************************************************
COL SFINKNISRLASLSTIGILSVAAYKHFEAGQGKKGAQHALNLLGLATLSLLDTFSCNKK
N315 SFINKNISRLASLSTIGILSVAAYKHFEAGQGKKGAQHALDLLGLATLSLLDTFSCNKK
NCTC8325 SFINKNISRLASLSTIGILSVAAYKHFEAGQGKKGAQHALNLLGLATLSLLDTFSCNKK
Newman SFINKNISRLASLSTIGILSVAAYKHFEAGQGKKGAQHALNLLGLATLSLLDTFSCNKK
USA300_FPR3757 SFINKNISRLASLSTIGILSVAAYKHFEAGQGKKGAQHALNLLGLATLSLLDTFSCNKK
****************************************:******************