Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN006439000
- symbol?: —
- synonym:
- description?: energy-coupling factor transporter transmembrane protein EcfT
- energy-coupling factor transporter transmembrane protein EcfT
- cobalt transport family protein
- cobalt transport protein
- ABC transporter permease
- cobalt (Co2+) ABC superfamily ATP binding cassette transporter, membrane protein
- cobalt ABC transporter
- transmembrane component MtsC
- Transmembrane component MtsC of energizing module of methionine-regulated ECF transporter
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6479823..6480656
- synteny block?: BlockID0051460
- occurrence?: in 82% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2623 (mtsC)
08BA02176:
—
11819-97:
MS7_2688
6850:
RSAU_002528
71193:
—
ECT-R 2:
ECTR2_2536
ED133:
—
ED98:
SAAV_2757
HO 5096 0412:
—
JH1:
SaurJH1_2764
JH9:
SaurJH9_2707
JKD6008:
SAA6008_02742
JKD6159:
SAA6159_02580
LGA251:
—
M013:
M013TW_2666
MRSA252:
SAR2765
MSHR1132:
SAMSHR1132_25110
MSSA476:
SAS2568
Mu3:
SAHV_2667
Mu50:
SAV2683
MW2:
MW2602
RF122:
SAB2559c
ST398:
—
T0131:
SAT0131_02962
TCH60:
HMPREF0772_10503
TW20:
SATW20_28200
USA300_TCH1516:
USA300HOU_2685
VC40:
SAVC_12290
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MNQYNTIGFHPGNSRIHQLNATVKLLFLLVVSISAMVTYDTRYLILISASSILLVKYAHI
N315 MNQYNTIGFHPGNSRIHQLNATVKLLFLLVVSISAMVTYDTRYLILISASSILLFKYAHI
NCTC8325 MNQYNTIGFHPGNSRIHQLNATVKLLFLLVVSISAMVTYDTRYLILISASSILLVKYAHI
Newman MNQYNTIGFHPGNSRIHQLNATVKLLFLLVVSISAMVTYDTRYLILISASSILLVKYAHI
USA300_FPR3757 MNQYNTIGFHPGNSRIHQLNATVKLLFLLVVSISAMVTYDTRYLILISASSILLVKYAHI
******************************************************.*****
COL EWKQVRFVVKFILFFTILNIIAVYIFDPEYGVKIYNQRTELVNGIGRFTLTSQELFYLFN
N315 EWKQVRFVVKFILFFTILNIIAVYIFDPEYGVKIYNQRTELVNGIGRFTLTSQELFYLFN
NCTC8325 EWKQVRFVVKFILFFTILNIIAVYIFDPEYGVKIYNQRTELVNGIGRFTLTSQELFYLFN
Newman EWKQVRFVVKFILFFTILNIIAVYIFDPEYGVKIYNQRTELVNGIGRFTLTSQELFYLFN
USA300_FPR3757 EWKQVRFVVKFILFFTILNIIAVYIFDPEYGVKIYNQRTELVNGIGRFTLTSQELFYLFN
************************************************************
COL LILKYISTVPLALIFLFTTNPSHFAASLNQLGVNYKISYAVSLALRYIPDIQETYFNISQ
N315 LILKYISTVPLALIFLFTTNPSHFAASLNQLGVNYKISYAVSLALRYIPDIQETYFNISQ
NCTC8325 LILKYISTVPLALIFLFTTNPSHFAASLNQLGVNYKISYAVSLALRYIPDIQETYFNISQ
Newman LILKYISTVPLALIFLFTTNPSHFAASLNQLGVNYKISYAVSLALRYIPDIQETYFNISQ
USA300_FPR3757 LILKYISTVPLALIFLFTTNPSHFAASLNQLGVNYKISYAVSLALRYIPDIQETYFNISQ
************************************************************
COL AQQARGYDNSKKAKFTSRVKGIKRIVLPLIFSSIERIDTISTAMELRQFGQYKRRTWYVK
N315 AQQARGYDNSKKAKFTSRVKGIKRIVLPLIFSSIERIDTISTAMELRQFGQYKRRTWYVK
NCTC8325 AQQARGYDNSKKAKFTSRVKGIKRIVLPLIFSSIERIDTISTAMELRQFGQYKRRTWYVK
Newman AQQARGYDNSKKAKFTSRVKGIKRIVLPLIFSSIERIDTISTAMELRQFGQYKRRTWYVK
USA300_FPR3757 AQQARGYDNSKKAKFTSRVKGIKRIVLPLIFSSIERIDTISTAMELRQFGQYKRRTWYVK
************************************************************
COL KQLKKDDYVVLCLTLILLMLVVTLFFLNNSRYFNPWH
N315 KQLKKDDYVVLCLTLILLMLVVTLFFLNNSRYFNPWH
NCTC8325 KQLKKDDYVVLCLTLILLMLVVTLFFLNNSRYFNPWH
Newman KQLKKDDYVVLCLTLILLMLVVTLFFLNNSRYFNPWH
USA300_FPR3757 KQLKKDDYVVLCLTLILLMLVVTLFFLNNSRYFNPWH
*************************************