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⊟Summary[edit | edit source]
- pan ID?: SAUPAN006443000
- symbol?: —
- synonym:
- description?: polyisoprenoid-binding protein
- polyisoprenoid-binding protein
- YceI domain protein
- base-induced perplasmic lipid-binding protein
- yceI-like domain protein
- YceI like family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 6488191..6488706
- synteny block?: BlockID0051500
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2627
08BA02176:
C248_2751
11819-97:
MS7_2692
6850:
RSAU_002532
71193:
ST398NM01_2733
ECT-R 2:
ECTR2_2540
ED133:
SAOV_2733
ED98:
SAAV_2761
HO 5096 0412:
SAEMRSA15_25880
JH1:
SaurJH1_2768
JH9:
SaurJH9_2711
JKD6008:
SAA6008_02746 (yceI)
JKD6159:
SAA6159_02584 (yceI)
LGA251:
SARLGA251_24550
M013:
M013TW_2670
MRSA252:
SAR2769
MSHR1132:
SAMSHR1132_25150
MSSA476:
SAS2572
Mu3:
SAHV_2671
Mu50:
SAV2687
MW2:
MW2606
RF122:
SAB2563
ST398:
SAPIG2733
T0131:
SAT0131_02966
TCH60:
HMPREF0772_10499
TW20:
SATW20_28240
USA300_TCH1516:
USA300HOU_2689
VC40:
SAVC_12310
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTNFTFDGAHSSLEFQIKHLMVSKVKGSFDQFDVAVEGDINDFSTLKATATIIPSSINTK
N315 MTNFTFDGAHSSLEFQIKHLMVSKVKGSFDQFDVAVEGDINDFSTLKATATIIPSSINTK
NCTC8325 MTNFTFDGAHSSLEFQIKHLMVSKVKGSFDQFDVAVEGDINDFSTLKATATIIPSSINTK
Newman MTNFTFDGAHSSLEFQIKHLMVSKVKGSFDQFDVAVEGDINDFSTLKATATIIPSSINTK
USA300_FPR3757 MTNFTFDGAHSSLEFQIKHLMVSKVKGSFDQFDVAVEGDINDFSTLKATATIIPSSINTK
************************************************************
COL NEARDNHLKSGDFFGTDEFDKITFVTKSVSESKVVGDLTIKGITNEETFDVEFNGVSKNP
N315 NEARDNHLKSGDFFGTDEFDKITFETKSVTENKVVGDLTIKGITNEETFDVEFNGVSKNP
NCTC8325 NEARDNHLKSGDFFGTDEFDKITFVTKSVSESKVVGDLTIKGITNEETFDVEFNGVSKNP
Newman NEARDNHLKSGDFFGTDEFDKITFVTKSVSESKVVGDLTIKGITNEETFDVEFNGVSKNP
USA300_FPR3757 NEARDNHLKSGDFFGTDEFDKITFVTKSVSESKVVGDLTIKGITNEETFDVEFNGVSKNP
************************ ****:*.****************************
COL MDGSQVTGIIVTGTINREKYGINFNQALETGGVMLGKDVKFEASAEFSISE
N315 MDGSQVTGVIVTGTINRENYGINFNQALETGGVMLGKDVKFEASAEFSISE
NCTC8325 MDGSQVTGIIVTGTINREKYGINFNQALETGGVMLGKDVKFEASAEFSISE
Newman MDGSQVTGIIVTGTINREKYGINFNQALETGGVMLGKDVKFEASAEFSISE
USA300_FPR3757 MDGSQVTGIIVTGTINREKYGINFNQALETGGVMLGKDVKFEASAEFSISE
********:*********:********************************