Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN006481000
- symbol?: —
- synonym:
- description?: DUF3147 family protein
- DUF3147 family protein
- membrane protein
- Permease
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 6517556..6517936
- synteny block?: BlockID0051880
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2645
08BA02176:
C248_2772
11819-97:
MS7_2711
6850:
RSAU_002555
71193:
ST398NM01_2752
ECT-R 2:
ECTR2_2558
ED133:
SAOV_2748c
ED98:
SAAV_2778
HO 5096 0412:
SAEMRSA15_26040
JH1:
SaurJH1_2786
JH9:
SaurJH9_2729
JKD6008:
SAA6008_02768
JKD6159:
SAA6159_02600
LGA251:
SARLGA251_24710
M013:
M013TW_2693
MRSA252:
SAR2792
MSHR1132:
SAMSHR1132_25340
MSSA476:
SAS2589
Mu3:
SAHV_2690
Mu50:
SAV2706
MW2:
MW2625
RF122:
SAB2583c
ST398:
SAPIG2752
T0131:
SAT0131_02989
TCH60:
HMPREF0772_10476
TW20:
SATW20_28440
USA300_TCH1516:
USA300HOU_2710
VC40:
SAVC_12420
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL -----MKFFVGGFAVLLSYIVSVTLPWKEFGGIFATFPAVFLVSMFITGMQYGDKVAVHV
N315 MKLTLMKFFVGGFAVLLSYIVSVTLPWKEFGGIFATFPAVFLVSMFITGMQYGDKVAVHV
NCTC8325 MKLTLMKFFVGGFAVLLSYIVSVTLPWKEFGGIFATFPAVFLVSMFITGMQYGDKVAVHV
Newman MKLTLMKFFVGGFAVLLSYIVSVTLPWKEFGGIFATFPAVFLVSMFITGMQYGDKVAVHV
USA300_FPR3757 MKLTLMKFFVGGFAVLLSYIVSVTLPWKEFGGIFATFPAVFLVSMFITGMQYGDKVAVHV
*******************************************************
COL SRGAVFGMTGVLVCILVTWMMLHMTHMWLISIVVGFLSWFISAVCIFEAVEFIAQKRLEK
N315 SRGAVFGMTGVLVCILVTWMMLHMTHMWLISIIVGFLSWFISAVCIFEAVEFIAQKRLEK
NCTC8325 SRGAVFGMTGVLVCILVTWMMLHMTHMWLISIVVGFLSWFISAVCIFEAVEFIAQKRLEK
Newman SRGAVFGMTGVLVCILVTWMMLHMTHMWLISIVVGFLSWFISAVCIFEAVEFIAQKRLEK
USA300_FPR3757 SRGAVFGMTGVLVCILVTWMMLHMTHMWLISIVVGFLSWFISAVCIFEAVEFIAQKRLEK
********************************:***************************
COL HSWKAGKSNSK
N315 HSWKAGKSNSK
NCTC8325 HSWKAGKSNSK
Newman HSWKAGKSNSK
USA300_FPR3757 HSWKAGKSNSK
***********