COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

NCBI: 10-JUN-2013

⊟Summary

• organism: Staphylococcus aureus USA300_FPR3757
• locus tag: SAUSA300_0296 [new locus tag: SAUSA300_RS01580 ]
• pan locus tag^?:
• symbol: SAUSA300_0296
• pan gene symbol^?: —
• synonym:
• product: hypothetical protein

⊟Genome View

⊟Gene

⊟General

• type: CDS
• locus tag: SAUSA300_0296 [new locus tag: SAUSA300_RS01580 ]
• symbol: SAUSA300_0296
• product: hypothetical protein
• replicon: chromosome
• strand: +
• coordinates: 348169..348660
• length: 492
• essential: unknown

⊟Accession numbers

• Gene ID: 3915149 NCBI
• RefSeq: YP_493010 NCBI
• BioCyc: see SAUSA300_RS01580
• MicrobesOnline: 1291811 MicrobesOnline

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

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  ATGACTTTCGAAGAAAAATTAAGTGAAATGTATAGCGAGATTGCGAATAAGATTATTAGC
  ATGATACCGGTAGAGTGGGAAAAAGTATATGCAATGGCATATATCGATGAAGAATGTGGA
  GAAGTGTTTTACAATTATACTGAACCAAGCAGTGATGAATTATTTTACTATACAAGTGTG
  ATAAAGAAGTATAATTTATTGAAATCAAGCTTTATGGATTCAGTATATGAGTTGCATGAT
  CAATTTGAGGAACTAAGAGAAGTATTTATAGAAGAAGGTCTTGAACCATGGACATCATGC
  GAATTTGATTTTACAAAAGAAGATAAATTAAAAGTTTCATTTGATTATATTGATTGGATA
  AATACAGAGTTTGATCAATTAGGCCGTGAAAATTATTATATGTACAAAAAATTTGGTGTT
  TTACCAGAAACGGAATATGAAATGGAGGAGGTTAAAGAAATCGAGCAATATATTAAAGAG
  CAAGAAGAATAG
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  492
  

⊟Protein

⊟General

• locus tag: SAUSA300_0296 [new locus tag: SAUSA300_RS01580 ]
• symbol: SAUSA300_0296
• description: hypothetical protein
• length: 163
• theoretical pI: 3.87618
• theoretical MW: 19898.1
• GRAVY: -0.625767

⊟Function

• TIGRFAM:
  conserved hypothetical protein (TIGR01741; HMM-score: 276)
• TheSEED  :
  • Repetitive hypothetical protein near ESAT cluster, SA0282 homolog
  Membrane Transport Protein secretion system, Type VII ESAT-6 proteins secretion system in Firmicutes  Repetitive hypothetical protein near ESAT cluster, SA0282 homolog
• PFAM:
  no clan defined DUF600; Protein of unknown function, DUF600 (PF04634; HMM-score: 148.5)
  and 1 more
  CBP4; CBP4 (PF07960; HMM-score: 13.8)

⊟Structure, modifications & cofactors

• domains:
• modifications:
• cofactors:
• effectors:

⊟Localization

• PSORTb: Cytoplasmic
  • Cytoplasmic Score: 7.5
  • Cytoplasmic Membrane Score: 1.15
  • Cellwall Score: 0.62
  • Extracellular Score: 0.73
  • Internal Helices: 0
• LocateP: Intracellular
  • Prediction by SwissProt Classification: Cytoplasmic
  • Pathway Prediction: No pathway
  • Intracellular possibility: 1
  • Signal peptide possibility: -1
  • N-terminally Anchored Score: 1
  • Predicted Cleavage Site: No CleavageSite
• SignalP: no predicted signal peptide
  • SP(Sec/SPI): 0.015416
  • TAT(Tat/SPI): 0.000409
  • LIPO(Sec/SPII): 0.000888
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI: 87160898 NCBI
• RefSeq: YP_493010 NCBI
• UniProt: A0A0H2XG60 UniProt

⊟Protein sequence

• MTFEEKLSEMYSEIANKIISMIPVEWEKVYAMAYIDEECGEVFYNYTEPSSDELFYYTSVIKKYNLLKSSFMDSVYELHDQFEELREVFIEEGLEPWTSCEFDFTKEDKLKVSFDYIDWINTEFDQLGRENYYMYKKFGVLPETEYEMEEVKEIEQYIKEQEE

⊟Experimental data

• experimentally validated:
• protein localization:
• quantitative data / protein copy number per cell:
• interaction partners:

⊟Expression & Regulation

⊟Operon

• MicrobesOnline: SAUSA300_0295 > SAUSA300_0296

⊟Regulation

• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Biological Material

⊟Mutants

⊟Expression vector

⊟lacZ fusion

⊟GFP fusion

⊟two-hybrid system

⊟FLAG-tag construct

⊟Antibody

⊟Other Information

You are kindly invited to share additional interesting facts.

⊟Literature

⊟References

⊟Relevant publications