Jump to navigation
Jump to search
PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40
NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS00245 [old locus tag: SAUSA300_0046 ]
- pan locus tag?: SAUPAN000511000
- symbol: SAUSA300_RS00245
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS00245 [old locus tag: SAUSA300_0046 ]
- symbol: SAUSA300_RS00245
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 56989..57609
- length: 621
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (56989..57609) NCBI
- BioCyc: SAUSA300_RS00245 BioCyc
- MicrobesOnline: see SAUSA300_0046
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541
601ATGAAATTCACTGAAGTGGAAGTTATCGAACATCTTGTAAAGGCATATAAAGAAGCAGGA
AAGCCTACTTATCCTCATGAAAATTTATATCGAGGACGTAATCATAGTATTTCAGGTATT
GGAGAAGACTTGCTGGGTGCTTATTTGATTAGTAGATTGGAAGGTGTCCAAATATTTATT
GATCAGCCTTTATCTATGATTGATAAATCTTTAAGTACAAGATATCCGGATTTATTAATT
TGTGAAGATAATGAAATTAAAAATATACTAGAAGTTAAAATGGACTTAGGATATCAAAGA
AAAGATTTTATAGATTATTGCCGAAAGAAAGAAGAATGGATTTCAAATATCGTAGGAAAA
CAGTGTGTATTGTCTAGAAAGAGAGAAGACAAAATTCCTATGAATATAGCTGATGATATT
AAATTTCATGTTGTGATTTACAGTGAAAACAATGGACCGAAGCGGTTTGATGAAGAAATC
ATGCCTATCGTTAATGAAACATGTCCACATATTGAAGTATATGTCCTAACAAGCGGTCAA
CACCCTAATTTAGTAAATGTTAATCTTGAAGGTATTAATATTAATAAAGATGAATTTGAA
ATATTAGTAAATGCGTTATAA60
120
180
240
300
360
420
480
540
600
621
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS00245 [old locus tag: SAUSA300_0046 ]
- symbol: SAUSA300_RS00245
- description: hypothetical protein
- length: 206
- theoretical pI: 5.02184
- theoretical MW: 23823.2
- GRAVY: -0.358252
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SAUSA300_0046
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI: 446595768 NCBI
- RefSeq: WP_000673114 NCBI
- UniProt: see SAUSA300_0046
⊟Protein sequence[edit | edit source]
- MKFTEVEVIEHLVKAYKEAGKPTYPHENLYRGRNHSISGIGEDLLGAYLISRLEGVQIFIDQPLSMIDKSLSTRYPDLLICEDNEIKNILEVKMDLGYQRKDFIDYCRKKEEWISNIVGKQCVLSRKREDKIPMNIADDIKFHVVIYSENNGPKRFDEEIMPIVNETCPHIEVYVLTSGQHPNLVNVNLEGININKDEFEILVNAL
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available