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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus USA300_FPR3757
  • locus tag: SAUSA300_RS01505 [old locus tag: SAUSA300_0281 ]
  • pan locus tag?: SAUPAN001178000
  • symbol: SAUSA300_RS01505
  • pan gene symbol?: esaB
  • synonym:
  • product: type VII secretion protein EsaB

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SAUSA300_RS01505 [old locus tag: SAUSA300_0281 ]
  • symbol: SAUSA300_RS01505
  • product: type VII secretion protein EsaB
  • replicon: chromosome
  • strand: +
  • coordinates: 334318..334599
  • length: 282
  • essential: unknown other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    TTGTCATTTTTTCAATTCATAAAGGGAGACGAACGAAAAATGAATCAGCACGTAAAAGTA
    ACATTTGATTTTACTAATTATAATTACGGCACATATGACTTAGCAGTACCAGCATATTTA
    CCGATAAAAAACTTAATAGCTTTAGTATTGGATAGTTTGGACATTTCAATATTTGATGTC
    AATACACAAATTAAAGTGATGACGAAAGGTCAATTACTTGTTGAAAATGATCGACTCATT
    GATTATCAAATCGCTGATGGAGATATTTTGAAGTTACTATAG
    60
    120
    180
    240
    282

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SAUSA300_RS01505 [old locus tag: SAUSA300_0281 ]
  • symbol: SAUSA300_RS01505
  • description: type VII secretion protein EsaB
  • length: 93
  • theoretical pI: 4.65437
  • theoretical MW: 10735.4
  • GRAVY: 0.0860215

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: see SAUSA300_0281
  • PFAM:
    Ubiquitin (CL0072) YukD; WXG100 protein secretion system (Wss), protein YukD (PF08817; HMM-score: 43.4)
    and 4 more
    ubiquitin; Ubiquitin family (PF00240; HMM-score: 17.4)
    DMT (CL0184) Nuc_sug_transp; Nucleotide-sugar transporter (PF04142; HMM-score: 14.7)
    Ubiquitin (CL0072) Rad60-SLD; Ubiquitin-2 like Rad60 SUMO-like (PF11976; HMM-score: 14.3)
    no clan defined DUF5488; Family of unknown function (DUF5488) (PF17590; HMM-score: 12.4)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.003357
    • TAT(Tat/SPI): 0.00014
    • LIPO(Sec/SPII): 0.000289
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MSFFQFIKGDERKMNQHVKVTFDFTNYNYGTYDLAVPAYLPIKNLIALVLDSLDISIFDVNTQIKVMTKGQLLVENDRLIDYQIADGDILKLL

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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