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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS01870 [old locus tag: SAUSA300_0353 ]
- pan locus tag?: SAUPAN001895000
- symbol: SAUSA300_RS01870
- pan gene symbol?: —
- synonym:
- product: ABC-2 transporter family protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS01870 [old locus tag: SAUSA300_0353 ]
- symbol: SAUSA300_RS01870
- product: ABC-2 transporter family protein
- replicon: chromosome
- strand: +
- coordinates: 403341..403970
- length: 630
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (403341..403970) NCBI
- BioCyc: SAUSA300_RS01870 BioCyc
- MicrobesOnline: see SAUSA300_0353
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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601ATGAAAGGTATGTTCCTAAGTAGTTTTTATGCAACGAGAAAGCAAACATATATTTATTTT
ATAGTCGCTATTATAGCTGCAGGATACTTTGCAGTATTTAATCCGTTGATGAGTTCGGCA
ATGGCTGGGGTTATGTTAATCACACCTATTACTGATAATATTAAACATGAAAAAGACTCA
AGATGGATGTATTATGTATCTACTTTACCGGTTAAACGTAGTGATTATATTAAGTCATAC
TTTGCCTTTTATTTAATCTTATTCGGTGCAAGTTTAATGATTGGATTAGTTGTGACTACG
ATTGTGACCCAAAGTGTGATGATTGGTATTATGTCAGGTTTAATGAGTTTTGGTATCATA
GGGGCATACTCTATCATTTTCCCATTGACATTTAAATTTGGCGCTGAAAACTCCAATGTC
ATTATGATATGTGCATCTATACTACTACTTATTTCTTTCGTGGTCTTTTTCTTTATATAT
GGTATGGTTAGTGGTGCATCTGCATTAGAATTTGAAAAAATTAGCACTGAAGGATGGCTA
GTTGTCATAGCATATGCGGTCATTGGTATAGTTATAACGAGCGTTTCTTATATATTGTCT
ATTAAAATTTTTAACAAACAAGAACTATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS01870 [old locus tag: SAUSA300_0353 ]
- symbol: SAUSA300_RS01870
- description: ABC-2 transporter family protein
- length: 209
- theoretical pI: 9.34389
- theoretical MW: 23255.7
- GRAVY: 0.997608
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SAUSA300_0353
- PFAM: ABC-2 (CL0181) ABC2_membrane_5; ABC-2 family transporter protein (PF13346; HMM-score: 115.7)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 5
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.365762
- TAT(Tat/SPI): 0.045178
- LIPO(Sec/SPII): 0.013776
- predicted transmembrane helices (TMHMM): 5
⊟Accession numbers[edit | edit source]
- GI: 446600368 NCBI
- RefSeq: WP_000677714 NCBI
- UniProt: see SAUSA300_0353
⊟Protein sequence[edit | edit source]
- MKGMFLSSFYATRKQTYIYFIVAIIAAGYFAVFNPLMSSAMAGVMLITPITDNIKHEKDSRWMYYVSTLPVKRSDYIKSYFAFYLILFGASLMIGLVVTTIVTQSVMIGIMSGLMSFGIIGAYSIIFPLTFKFGAENSNVIMICASILLLISFVVFFFIYGMVSGASALEFEKISTEGWLVVIAYAVIGIVITSVSYILSIKIFNKQEL
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.