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COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159JSNZLGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40
NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS03135
- pan locus tag?:
- symbol: SAUSA300_RS03135
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS03135
- symbol: SAUSA300_RS03135
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 658731..659111
- length: 381
- essential: unknown
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361TTGAGAAAGTACGGTAACTTCTTTAATGTTCAGTTTGAAAAACAACTAGCAATCACTGTA
TTTTTTATCATGTTAATAGGGATGTTAATTTTTTATTTTTATCTAAATAAAAAATTAACA
TTAAAAATTTTTAATACCAACGTGGTTAATAAGAATAGAGTTGTATTAATACCGACTTTC
AAACAAGGATTGTTAATAGTTTTTGCGTACTTTTTTTTAGGAAGCGCTTCAATATTTACT
TTAACCATTCTTTTGACGACAGAGTCACAAAATATAATAATATTTTTAACTTGGGTTATT
ATCACGATGTTTTTCTTTTTAGTGAATATGGCTTCGATAGGTAATAAAAATGTTCATGTT
ATTTTAAGAATAAACGAGTAG60
120
180
240
300
360
381
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS03135
- symbol: SAUSA300_RS03135
- description: hypothetical protein
- length: 126
- theoretical pI: 10.7363
- theoretical MW: 14765.8
- GRAVY: 0.900794
⊟Function[edit | edit source]
- TIGRFAM: tandem five-TM protein (TIGR01218; HMM-score: 73.9)
- TheSEED:
- PFAM: no clan defined DUF443; Protein of unknown function (DUF443) (PF04276; HMM-score: 93.6)and 2 moreCation_ATPase_C; Cation transporting ATPase, C-terminus (PF00689; HMM-score: 10.8)DUF2615; Protein of unknown function (DUF2615) (PF11027; HMM-score: 8.7)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 3
- DeepLocPro: Cytoplasmic Membrane
- Cytoplasmic Score: 0.0001
- Cytoplasmic Membrane Score: 0.9934
- Cell wall & surface Score: 0
- Extracellular Score: 0.0065
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.001734
- TAT(Tat/SPI): 0.000117
- LIPO(Sec/SPII): 0.002168
- predicted transmembrane helices (TMHMM): 3
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MRKYGNFFNVQFEKQLAITVFFIMLIGMLIFYFYLNKKLTLKIFNTNVVNKNRVVLIPTFKQGLLIVFAYFFLGSASIFTLTILLTTESQNIIIFLTWVIITMFFFLVNMASIGNKNVHVILRINE
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.