COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

NCBI: 02-MAR-2017

⊟Summary

• organism: Staphylococcus aureus USA300_FPR3757
• locus tag: SAUSA300_RS03135
• pan locus tag^?:
• symbol: SAUSA300_RS03135
• pan gene symbol^?: —
• synonym:
• product: hypothetical protein

⊟Gene

⊟General

• type: CDS
• locus tag: SAUSA300_RS03135
• symbol: SAUSA300_RS03135
• product: hypothetical protein
• replicon: chromosome
• strand: +
• coordinates: 658731..659111
• length: 381
• essential: unknown

⊟Accession numbers

• Location: NC_007793 (658731..659111) NCBI
• BioCyc:
• MicrobesOnline:

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
  241
  301
  361
  
  TTGAGAAAGTACGGTAACTTCTTTAATGTTCAGTTTGAAAAACAACTAGCAATCACTGTA
  TTTTTTATCATGTTAATAGGGATGTTAATTTTTTATTTTTATCTAAATAAAAAATTAACA
  TTAAAAATTTTTAATACCAACGTGGTTAATAAGAATAGAGTTGTATTAATACCGACTTTC
  AAACAAGGATTGTTAATAGTTTTTGCGTACTTTTTTTTAGGAAGCGCTTCAATATTTACT
  TTAACCATTCTTTTGACGACAGAGTCACAAAATATAATAATATTTTTAACTTGGGTTATT
  ATCACGATGTTTTTCTTTTTAGTGAATATGGCTTCGATAGGTAATAAAAATGTTCATGTT
  ATTTTAAGAATAAACGAGTAG
  60
  120
  180
  240
  300
  360
  381
  

⊟Protein

⊟General

• locus tag: SAUSA300_RS03135
• symbol: SAUSA300_RS03135
• description: hypothetical protein
• length: 126
• theoretical pI: 10.7363
• theoretical MW: 14765.8
• GRAVY: 0.900794

⊟Function

• TIGRFAM:
  tandem five-TM protein (TIGR01218; HMM-score: 73.9)
• TheSEED:
• PFAM:
  no clan defined DUF443; Protein of unknown function (DUF443) (PF04276; HMM-score: 89.2)
  and 4 more
  ABC-2 (CL0181) ABC2_membrane_3; ABC-2 family transporter protein (PF12698; HMM-score: 12)
  no clan defined DUF2615; Protein of unknown function (DUF2615) (PF11027; HMM-score: 11.8)
  Cation_ATPase_C; Cation transporting ATPase, C-terminus (PF00689; HMM-score: 8.4)
  APC (CL0062) AA_permease_C; C-terminus of AA_permease (PF13906; HMM-score: 7.1)

⊟Structure, modifications & cofactors

• domains:
• modifications:
• cofactors:
• effectors:

⊟Localization

• PSORTb: Cytoplasmic Membrane
  • Cytoplasmic Score: 0
  • Cytoplasmic Membrane Score: 10
  • Cellwall Score: 0
  • Extracellular Score: 0
  • Internal Helices: 3
• LocateP:
• SignalP: no predicted signal peptide
  • SP(Sec/SPI): 0.001734
  • TAT(Tat/SPI): 0.000117
  • LIPO(Sec/SPII): 0.002168
• predicted transmembrane helices (TMHMM): 3

⊟Accession numbers

• GI: 447156565 NCBI
• RefSeq: WP_001233821 NCBI
• UniProt:

⊟Protein sequence

• MRKYGNFFNVQFEKQLAITVFFIMLIGMLIFYFYLNKKLTLKIFNTNVVNKNRVVLIPTFKQGLLIVFAYFFLGSASIFTLTILLTTESQNIIIFLTWVIITMFFFLVNMASIGNKNVHVILRINE

⊟Experimental data

• experimentally validated:
• protein localization:
• quantitative data / protein copy number per cell:
• interaction partners:

⊟Expression & Regulation

⊟Regulation

• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Other Information

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