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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

organism: Staphylococcus aureus USA300_FPR3757
locus tag: SAUSA300_RS03425 [old locus tag: SAUSA300_0639 ]
pan locus tag^?: SAUPAN002531000
symbol: SAUSA300_RS03425
pan gene symbol^?: —
synonym:
product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

type: CDS
locus tag: SAUSA300_RS03425 [old locus tag: SAUSA300_0639 ]
symbol: SAUSA300_RS03425
product: hypothetical protein
replicon: chromosome
strand: +
coordinates: 713280..713777
length: 498
essential: unknown other strains

⊟Accession numbers[edit | edit source]

Location: NC_007793 (713280..713777) NCBI
BioCyc: SAUSA300_RS03425 BioCyc
MicrobesOnline: see SAUSA300_0639

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

1
61
121
181
241
301
361
421
481
ATGCAACACCTTATAAAAAAACATGTATTGAATGGCGAGTTTGATTTAGTACGACAATTG
ATGTCCGAAACAGATTTTATGGAATTTGAAGAAGCATATATTTCAAGTGCGCATGAAGTA
GAAAGTATGATGTTTTATACATGTATTTTAGATATGATTAAGTACGAAGAATCATCTGAA
ATGCATGACTTAGCATTTTTATTGCTTGTGTATCCACTAAGTGAATATGAAGGTGCTTTG
GATTCTGCTTATTATCATGCAGACGCTTCCATAAAACTTACTGACGGCAAAGAAGTTAAA
AGTTTGTTACAAATGTTATTATTGCATGCGATACCAACACCTGTTATTTCAGATAAGAAG
GCTTTTGATATCGCCAAGCAAATTTTAAAATTAGATCCTAATAATAATGTTGCTCGTAAC
GTCTTAAAAGACACTGCCAAACGTATGGACAACGTTGTTGTTGATATAAATGAATTACAC
CAACGTAATGCACGTTAA
60
120
180
240
300
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420
480
498

⊟Protein[edit | edit source]

⊟General[edit | edit source]

locus tag: SAUSA300_RS03425 [old locus tag: SAUSA300_0639 ]
symbol: SAUSA300_RS03425
description: hypothetical protein
length: 165
theoretical pI: 4.89597
theoretical MW: 19008.8
GRAVY: -0.181212

⊟Function[edit | edit source]

TIGRFAM:
TheSEED: see SAUSA300_0639
PFAM:

⊟Structure, modifications & cofactors[edit | edit source]

domains:
modifications:
cofactors:
effectors:

⊟Localization[edit | edit source]

PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
LocateP:
SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.001251
- TAT(Tat/SPI): 0.00008
- LIPO(Sec/SPII): 0.0002
predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

GI: 447086829 NCBI
RefSeq: WP_001164085 NCBI
UniProt: see SAUSA300_0639

⊟Protein sequence[edit | edit source]

MQHLIKKHVLNGEFDLVRQLMSETDFMEFEEAYISSAHEVESMMFYTCILDMIKYEESSEMHDLAFLLLVYPLSEYEGALDSAYYHADASIKLTDGKEVKSLLQMLLLHAIPTPVISDKKAFDIAKQILKLDPNNNVARNVLKDTAKRMDNVVVDINELHQRNAR

⊟Experimental data[edit | edit source]

experimentally validated: data available for COL, NCTC8325
protein localization:
quantitative data / protein copy number per cell:
interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

regulator:

⊟Transcription pattern[edit | edit source]

S.aureus Expression Data Browser: data available for NCTC8325

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

Aureolib: no data available

⊟Protein stability[edit | edit source]

half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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