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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS04480 [old locus tag: SAUSA300_0830 ]
- pan locus tag?: SAUPAN003023000
- symbol: SAUSA300_RS04480
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS04480 [old locus tag: SAUSA300_0830 ]
- symbol: SAUSA300_RS04480
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 910801..911184
- length: 384
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (910801..911184) NCBI
- BioCyc: SAUSA300_RS04480 BioCyc
- MicrobesOnline: see SAUSA300_0830
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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361TTGATAAAAGTAGATCAACATTACTTTGAATTAATAGAAAATTATCGCGAATGTTTTAAT
GAAGAACAATTTATTGCTAGGTATTCAGATATTTTAGATAAATATGATTACATAGTTGGT
GACTATGGTTACGATCAATTACGATTAAAAGGTTTTTACAAAGATTCTAATAAAAAAGCA
GAGATGAGTAAACGTTTTTCAAATATTCAAGATTACATATTTGAATATTGTAACTTTGGT
TGTCCTTACTTTGTATTAAGACATTTGTCTAAACAAGAGGTTAAAAAGTTAATCGAAGAA
GTTCATCCGTCTGATGTGATAGATGACGACAATAAACTTCAAGATGTGAAGATTAAGCCA
ACCATTCAAGATACTGAACATTAA60
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384
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS04480 [old locus tag: SAUSA300_0830 ]
- symbol: SAUSA300_RS04480
- description: hypothetical protein
- length: 127
- theoretical pI: 4.85585
- theoretical MW: 15401.2
- GRAVY: -0.78189
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SAUSA300_0830
- PFAM: no clan defined DUF1027; Protein of unknown function (DUF1027) (PF06265; HMM-score: 126.6)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.007011
- TAT(Tat/SPI): 0.000476
- LIPO(Sec/SPII): 0.001928
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI: 446521098 NCBI
- RefSeq: WP_000598444 NCBI
- UniProt: see SAUSA300_0830
⊟Protein sequence[edit | edit source]
- MIKVDQHYFELIENYRECFNEEQFIARYSDILDKYDYIVGDYGYDQLRLKGFYKDSNKKAEMSKRFSNIQDYIFEYCNFGCPYFVLRHLSKQEVKKLIEEVHPSDVIDDDNKLQDVKIKPTIQDTEH
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.