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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

organism: Staphylococcus aureus USA300_FPR3757
locus tag: SAUSA300_RS07030 [old locus tag: SAUSA300_1294 ]
pan locus tag^?: SAUPAN003815000
symbol: SAUSA300_RS07030
pan gene symbol^?: msa
synonym:
product: protein msa

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

type: CDS
locus tag: SAUSA300_RS07030 [old locus tag: SAUSA300_1294 ]
symbol: SAUSA300_RS07030
product: protein msa
replicon: chromosome
strand: -
coordinates: 1425295..1425696
length: 402
essential: unknown other strains

⊟Accession numbers[edit | edit source]

Location: NC_007793 (1425295..1425696) NCBI
BioCyc: SAUSA300_RS07030 BioCyc
MicrobesOnline: see SAUSA300_1294

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

1
61
121
181
241
301
361
ATGAAATATCTTATCCTTAGTTTAGTTGCTAATTTATTAGTTTTCGGTGTATTATCTGCA
ATTGGATTAAATATTAATATTTTAGCAGCAATGATGATTGTATTAGTGATTCCGATAATG
ATTTCTGGGATACTATTTTTCAAAACTAATATTGATAAAACATACATATTTTTTAACATC
ATATTTATCGACTTTTATTACTATATTTACAATGTACATTTAATGACTTTGCCAAAGTTT
AATAATTATATTAAAGCAGAGATGATGGAATTAGAAGATATTGATGTATTAATTACAAGT
AAAGATTTTGGATTTGATGAAATTCTGTTTTATACATTATATTTGTTGTTAATTCTTATC
GTTTTATATTATTTGAAAAAGCAAGTAAAGCATAAAATCTAA
60
120
180
240
300
360
402

⊟Protein[edit | edit source]

⊟General[edit | edit source]

locus tag: SAUSA300_RS07030 [old locus tag: SAUSA300_1294 ]
symbol: SAUSA300_RS07030
description: protein msa
length: 133
theoretical pI: 7.62953
theoretical MW: 15657
GRAVY: 1.02105

⊟Function[edit | edit source]

TIGRFAM:
TheSEED: see SAUSA300_1294
PFAM:

⊟Structure, modifications & cofactors[edit | edit source]

domains:
modifications:
cofactors:
effectors:

⊟Localization[edit | edit source]

PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 4
LocateP:
SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.011365
- TAT(Tat/SPI): 0.000747
- LIPO(Sec/SPII): 0.098377
predicted transmembrane helices (TMHMM): 4

⊟Accession numbers[edit | edit source]

GI: 446798945 NCBI
RefSeq: WP_000876201 NCBI
UniProt: see SAUSA300_1294

⊟Protein sequence[edit | edit source]

MKYLILSLVANLLVFGVLSAIGLNINILAAMMIVLVIPIMISGILFFKTNIDKTYIFFNIIFIDFYYYIYNVHLMTLPKFNNYIKAEMMELEDIDVLITSKDFGFDEILFYTLYLLLILIVLYYLKKQVKHKI

⊟Experimental data[edit | edit source]

experimentally validated:
protein localization:
quantitative data / protein copy number per cell:
interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

regulator:

⊟Transcription pattern[edit | edit source]

S.aureus Expression Data Browser: data available for NCTC8325

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

Aureolib: no data available

⊟Protein stability[edit | edit source]

half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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