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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS10745 [old locus tag: SAUSA300_1959 ]
- pan locus tag?: SAUPAN001396000
- symbol: SAUSA300_RS10745
- pan gene symbol?: —
- synonym:
- product: MBL fold metallo-hydrolase
⊟Additional information (user-provided)[edit | edit source]
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS10745 [old locus tag: SAUSA300_1959 ]
- symbol: SAUSA300_RS10745
- product: MBL fold metallo-hydrolase
- replicon: chromosome
- strand: -
- coordinates: 2116032..2116649
- length: 618
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (2116032..2116649) NCBI
- BioCyc: SAUSA300_RS10745 BioCyc
- MicrobesOnline: see SAUSA300_1959
⊟Phenotype[edit | edit source]
⊟Additional information (user-provided)[edit | edit source]
⊟DNA sequence[edit | edit source]
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601ATAAAATTTGAACGTGTTCAAAAGCATTTCAAATATAAAACAAGACATATAGCAGGGTGT
CTTATCACACACGAACATGGTGATCATGCAAAGTATACAAAGCAGTTTGTCGACAATGGT
GTAATCAGCTATATGACTGCTGGAACACAACAAGCTATGAATTTTGAAAGTCATCGCTTA
TGCACGATTAAGGCAAAGCAAGAGCTGCGAATAGGTACATGGTCAATTCTACCGTTTGAC
ATCGAACATGATGCTAACGAGCCTGTGGCTTTCTTATTACAAAGCACACTAGGTTATAAG
GTTCTGTATGTTACTGATACAAAGTATTTGAAATACAAATTTAATGGCATTACGCACATG
ATGCTAGAAGTTAATTATATCTATGAACAAATGCAAGAAAACATAAAAAACGGCAGTGTG
CACAGCACATTAGCAAACAGAATTATGGAGTCTCATTTTAGCTTAGAACATGCTATCGGA
ATGTTAAAAGCAAATGATTTAACTAGACTCGAAGAAATACATTTAATTCATTTAAGTAGT
CAAAATTCAAATGCAAAATACATTAAAAGTGAAATACAAAAAGTGACGGGCGCGCCCGTT
TATTTTGGAGGTTTATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS10745 [old locus tag: SAUSA300_1959 ]
- symbol: SAUSA300_RS10745
- description: MBL fold metallo-hydrolase
- length: 205
- theoretical pI: 8.92554
- theoretical MW: 23641
- GRAVY: -0.357073
⊟Function[edit | edit source]
- TIGRFAM: Cellular processes Detoxification hydroxyacylglutathione hydrolase (TIGR03413; EC 3.1.2.6; HMM-score: 18.6)and 1 moreTranscription RNA processing ribonuclease Z (TIGR02651; EC 3.1.26.11; HMM-score: 11)
- TheSEED: see SAUSA300_1959
- PFAM: Metallo-HOrase (CL0381) Lactamase_B_2; Beta-lactamase superfamily domain (PF12706; HMM-score: 34.9)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0.32
- Cytoplasmic Membrane Score: 9.55
- Cellwall Score: 0.12
- Extracellular Score: 0.01
- Internal Helices: 0
- DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.9328
- Cytoplasmic Membrane Score: 0.0328
- Cell wall & surface Score: 0.0004
- Extracellular Score: 0.034
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.013026
- TAT(Tat/SPI): 0.000949
- LIPO(Sec/SPII): 0.002487
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI: see SAUSA300_1959
- RefSeq: WP_071665632 NCBI
- UniProt: see SAUSA300_1959
⊟Additional information (user-provided)[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKFERVQKHFKYKTRHIAGCLITHEHGDHAKYTKQFVDNGVISYMTAGTQQAMNFESHRLCTIKAKQELRIGTWSILPFDIEHDANEPVAFLLQSTLGYKVLYVTDTKYLKYKFNGITHMMLEVNYIYEQMQENIKNGSVHSTLANRIMESHFSLEHAIGMLKANDLTRLEEIHLIHLSSQNSNAKYIKSEIQKVTGAPVYFGGL
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Additional information (user-provided)[edit | edit source]
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Additional information (user-provided)[edit | edit source]
⊟Other information (user-provided)[edit | edit source]
You can add further information about the gene and protein here. [edit]
⊟Literature[edit | edit source]
⊟References[edit | edit source]