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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS12960 [old locus tag: SAUSA300_2348 ]
- pan locus tag?: SAUPAN005934000
- symbol: SAUSA300_RS12960
- pan gene symbol?: —
- synonym:
- product: N-acetyltransferase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS12960 [old locus tag: SAUSA300_2348 ]
- symbol: SAUSA300_RS12960
- product: N-acetyltransferase
- replicon: chromosome
- strand: -
- coordinates: 2525508..2526044
- length: 537
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (2525508..2526044) NCBI
- BioCyc: SAUSA300_RS12960 BioCyc
- MicrobesOnline: see SAUSA300_2348
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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481ATGACAAAAACGATGATTCGACTCGCAAGTGAACAAGATGCAGAAAAATTGCAACAACTC
ATGCATGAAGCATTTACGCCTCTAAGAGAACTAGGTATTGATTGGCCTTCGGTTAATGCT
AATTTAGATGCTGTTAAAGAAAATATAGATAAAAATACTACATTTGTCATGACAATTGAT
GATGAAATTATATCTACGATTACGGTTAGATATCCTTGGGGAAGTGTGAAAAGTATTTCG
GGTTATCCTTTTGTCTGGTGGTTTGCGACAAATCCTGAGTATGAAGGGAAAGGCTATGGT
AGCCAATTACTTACTTATGTTGAAGAAGCATTTTTGCGAGATACGTTAAAGTCAGCGGCA
GTTACTTTAGGTACATCTGCAAGATTGCATCCGTGGTTACTTAAAATTTATGAAAAAAGA
GGTTATGAAATATACAGCGAACATGAAAATGATGATGGCGATTTAGGTGTGATCATGCGC
AAAGTATTGATACCCGAGCGCTTTGACGAAACAATATTAGGCCAACCACCATTTTAA60
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537
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS12960 [old locus tag: SAUSA300_2348 ]
- symbol: SAUSA300_RS12960
- description: N-acetyltransferase
- length: 178
- theoretical pI: 4.57447
- theoretical MW: 20425.1
- GRAVY: -0.319663
⊟Function[edit | edit source]
- TIGRFAM: Protein synthesis Ribosomal proteins: synthesis and modification ribosomal-protein-alanine acetyltransferase (TIGR01575; EC 2.3.1.128; HMM-score: 12.3)putative beta-lysine N-acetyltransferase (TIGR03827; EC 2.3.1.-; HMM-score: 11.9)
- TheSEED: see SAUSA300_2348
- PFAM: Acetyltrans (CL0257) Acetyltransf_1; Acetyltransferase (GNAT) family (PF00583; HMM-score: 34.9)Acetyltransf_7; Acetyltransferase (GNAT) domain (PF13508; HMM-score: 34.9)Acetyltransf_10; Acetyltransferase (GNAT) domain (PF13673; HMM-score: 34.2)and 3 moreAcetyltransf_9; Acetyltransferase (GNAT) domain (PF13527; HMM-score: 26.1)Acetyltransf_4; Acetyltransferase (GNAT) domain (PF13420; HMM-score: 12.9)GNAT_acetyltr_2; GNAT acetyltransferase 2 (PF13718; HMM-score: 12.9)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.003603
- TAT(Tat/SPI): 0.000388
- LIPO(Sec/SPII): 0.000444
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI: 446091462 NCBI
- RefSeq: WP_000169317 NCBI
- UniProt: see SAUSA300_2348
⊟Protein sequence[edit | edit source]
- MTKTMIRLASEQDAEKLQQLMHEAFTPLRELGIDWPSVNANLDAVKENIDKNTTFVMTIDDEIISTITVRYPWGSVKSISGYPFVWWFATNPEYEGKGYGSQLLTYVEEAFLRDTLKSAAVTLGTSARLHPWLLKIYEKRGYEIYSEHENDDGDLGVIMRKVLIPERFDETILGQPPF
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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