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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS13170 [old locus tag: SAUSA300_2381 ]
- pan locus tag?: SAUPAN005984000
- symbol: SAUSA300_RS13170
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS13170 [old locus tag: SAUSA300_2381 ]
- symbol: SAUSA300_RS13170
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 2560365..2561021
- length: 657
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (2560365..2561021) NCBI
- BioCyc: SAUSA300_RS13170 BioCyc
- MicrobesOnline: see SAUSA300_2381
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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601ATGAACCGAAAAATATTACCAGTTAAACCTATCAGTCAGCTATTTCCTATCCCTATGGTC
ATGGGGTGTGAAGGTGTTTCCGCAGCCATGATGTTGCAATACAACAACCAACATATCCCT
GCTACAGAAATTATGAGACATTGGCCGACACATCCGAACAATCCACATAAAGGTTATGTT
GGACATCACTTATTCATTAAGCTTGGCAATTATCATCAAACGATATTTCCAGAAGCATAT
GTACCATTTTTACAAAAATACAATCCTAATATCGTAGACGGCACTGGTAAATCGTTAGAA
GATCTTAAAGGTATTATCGATCAAGGTCAACCTGTGTTAATATACCATACTAATCTTGGT
TCTAAACCATTACTACGTGTTTTCCGCTTTGATAACAAGCCAGCGAAACAAGTTTCAAAT
ATTCACGTAACGTTACTCATTGGGTACGATGATTACTATTACTATTATATCGATCCACTT
TGGAGTCATATTCGTCGTGGCCTAGTTTTACCTGCCATCATTCCAAATCGCAAACAAATT
ATTAAAATTCGTAAAGAGAAAATGGAATACAGCTTTAATTCACCAGGAAGAAAGTGCATT
TATGTGCAACCACATTCATATACAATTGAAAATCAGCAACAAAATAAACACACGTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS13170 [old locus tag: SAUSA300_2381 ]
- symbol: SAUSA300_RS13170
- description: hypothetical protein
- length: 218
- theoretical pI: 9.94147
- theoretical MW: 25390.3
- GRAVY: -0.437156
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SAUSA300_2381
- ⊞PFAM: Peptidase_CA (CL0125) Peptidase_C39_2; Peptidase_C39 like family (PF13529; HMM-score: 71.3)and 1 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI: 447003025 NCBI
- RefSeq: WP_001080281 NCBI
- UniProt: see SAUSA300_2381
⊟Protein sequence[edit | edit source]
- MNRKILPVKPISQLFPIPMVMGCEGVSAAMMLQYNNQHIPATEIMRHWPTHPNNPHKGYVGHHLFIKLGNYHQTIFPEAYVPFLQKYNPNIVDGTGKSLEDLKGIIDQGQPVLIYHTNLGSKPLLRVFRFDNKPAKQVSNIHVTLLIGYDDYYYYYIDPLWSHIRRGLVLPAIIPNRKQIIKIRKEKMEYSFNSPGRKCIYVQPHSYTIENQQQNKHT
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available