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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_RS13425 [old locus tag: SAUSA300_2423 ]
- pan locus tag?: SAUPAN006063000
- symbol: SAUSA300_RS13425
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_RS13425 [old locus tag: SAUSA300_2423 ]
- symbol: SAUSA300_RS13425
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 2608829..2609020
- length: 192
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: NC_007793 (2608829..2609020) NCBI
- BioCyc: SAUSA300_RS13425 BioCyc
- MicrobesOnline: see SAUSA300_2423
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181ATGAGAAAAGAGATTGAAGCGCTTATTTTCTCAGACGTAAGTAGCTATGATATTTACGTG
AACACTGGTGTAAATCAAGGATTAATTGGTGACATCAAAGATGGTTACCTAACTATTGAT
TCTATGCCTTACATTGATGCTGAGCGTTTGTATCACTTTGCTATGGAACGTAAATCGTTA
GTCACTAACTAG60
120
180
192
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_RS13425 [old locus tag: SAUSA300_2423 ]
- symbol: SAUSA300_RS13425
- description: hypothetical protein
- length: 63
- theoretical pI: 4.38077
- theoretical MW: 7221.15
- GRAVY: -0.146032
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SAUSA300_2423
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.01579
- TAT(Tat/SPI): 0.000426
- LIPO(Sec/SPII): 0.001807
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI: 447147123 NCBI
- RefSeq: WP_001224379 NCBI
- UniProt: see SAUSA300_2423
⊟Protein sequence[edit | edit source]
- MRKEIEALIFSDVSSYDIYVNTGVNQGLIGDIKDGYLTIDSMPYIDAERLYHFAMERKSLVTN
⊟Experimental data[edit | edit source]
- experimentally validated: data available for NCTC8325
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator: Rex see SAUSA300_2423
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.