COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

NCBI: 02-MAR-2017

⊟Summary

• organism: Staphylococcus aureus USA300_FPR3757
• locus tag: SAUSA300_RS15350
• pan locus tag^?:
• symbol: SAUSA300_RS15350
• pan gene symbol^?: —
• synonym:
• product: hypothetical protein

⊟Genome View

⊟Gene

⊟General

• type: CDS
• locus tag: SAUSA300_RS15350
• symbol: SAUSA300_RS15350
• product: hypothetical protein
• replicon: chromosome
• strand: -
• coordinates: 1591981..1593135
• length: 1155
• essential: unknown

⊟Accession numbers

• Location: NC_007793 (1591981..1593135) NCBI
• BioCyc: SAUSA300_RS15350 BioCyc
• MicrobesOnline:

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
  241
  301
  361
  421
  481
  541
  601
  661
  721
  781
  841
  901
  961
  1021
  1081
  1141
  
  ATGGATGGGCGAATTCCAATAAATGTTTGGACAGGAGATTCGATTGCACGTTCTGGAAGA
  GGAACTTTAATTAAACTTAATTTAGAAAATCTTGATGCGTTGAGTAAACTGATTACTGGT
  GAAACAAGTGGTATGTTAGCAGAATGCGTAATCTTTTTAAATGAAAGTTTTAACATCTCA
  GAAAATGAAAATAAAAATTTTGCAGATAGAAAGAAACAATTATCAGAAGGATTTAAGGAT
  AAGATTAACTTATTTCAGTTAGAAGAAATGGAAAGAACTTTAATTAGTAAAATAAACTCA
  CTTGAAGAAGTTGCAGATGAAACAATAGAAAGTATTAGTGCTGTTAAACACTTATTACCT
  GATTTTGCATTGGATGCATTAAAAGAAAGAATTAATGAGTTGTTTAAAGGTATAAAATCT
  TTTATAGAAAAAGTGTATGATAGTATAGATAATGAAATTTTAGAAATTTTCAAAAATATA
  GATCACGACTTCAGAGATGGAGTATCTGAAGAAATGATGAAACATTTGAAAGTAGTGAAA
  CAGAATATAGACCAAATAAAAAATCAAAATGATATTTATGGTAGGCAAATTGCAGATATT
  AGAAGTATTATGAAACAACAAGATGCAACAATTTTAGATGGAAATTTTCAAATTAATTGT
  AGCGGCGAAAATATGGTACAGGGTCTAGTTATACCTTCTAATTATTTAGGAAGAAAAATG
  AAAATATTAAAAGACCATATCGATGATGGTATTAAAAAAATAGCAGACTATGTTCAAGGT
  ATATATGATGAATATGCATCGAAAATTGTCGATGTAATAAAATATTTGATTAATACAATT
  CCCAAAATACGTAAGAATTTAAGACATGCAATTGAAATGTTAAATGTAAAAAAGAAAGAA
  TTTTTGTCCCTGATTCCTAATGTAACTTGTAATTATATTAAAACTAAATTAGAAGAATTA
  GATAATACTTTAGGCAAATGGGAGCCTTTTCTTAATGATTTAAAAGCAGTGTCACCAATT
  TTAGATAACCATTTAGATGATATTGTTAAGAACATGAAGCCTTTGATTGTACAAATGATA
  TTTGAACCATCACATTATGATGATATGTTTATTTCAAGAAAAGCTTTAACGCCAGTGTTC
  TCAAGCGTTTTATAA
  60
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  720
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  840
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  1020
  1080
  1140
  1155
  

⊟Protein

⊟General

• locus tag: SAUSA300_RS15350
• symbol: SAUSA300_RS15350
• description: hypothetical protein
• length: 384
• theoretical pI: 5.37373
• theoretical MW: 44028.6
• GRAVY: -0.273958

⊟Function

• TIGRFAM:
  Cellular processes Cellular processes Sporulation and germination sporulation integral membrane protein YtvI (TIGR02872; HMM-score: 14.6)
  Metabolism Purines, pyrimidines, nucleosides, and nucleotides Nucleotide and nucleoside interconversions putative dGTPase (TIGR01353; EC 3.1.5.1; HMM-score: 13.8)
• TheSEED:
• PFAM:
  no clan defined Baculo_PEP_C; Baculovirus polyhedron envelope protein, PEP, C terminus (PF04513; HMM-score: 27.8)
  Apolipoprotein; Apolipoprotein A1/A4/E domain (PF01442; HMM-score: 22.3)
  and 7 more
  Carbpep_Y_N; Carboxypeptidase Y pro-peptide (PF05388; HMM-score: 18.4)
  TerB_C; TerB-C domain (PF15615; HMM-score: 13.7)
  DUF1664; Protein of unknown function (DUF1664) (PF07889; HMM-score: 12.2)
  post-AAA (CL0604) Rep_fac_C; Replication factor C C-terminal domain (PF08542; HMM-score: 11.6)
  no clan defined Mt_ATP-synt_D; ATP synthase D chain, mitochondrial (ATP5H) (PF05873; HMM-score: 11.5)
  VPS23_C (CL0596) Mod_r; Modifier of rudimentary (Mod(r)) protein (PF07200; HMM-score: 11.3)
  no clan defined Dict-STAT-coil; Dictyostelium STAT, coiled coil (PF09267; HMM-score: 8.1)

⊟Structure, modifications & cofactors

• domains:
• modifications:
• cofactors:
• effectors:

⊟Localization

• PSORTb: Cytoplasmic
  • Cytoplasmic Score: 7.5
  • Cytoplasmic Membrane Score: 1.15
  • Cellwall Score: 0.62
  • Extracellular Score: 0.73
  • Internal Helices: 0
• LocateP:
• SignalP: no predicted signal peptide
  • SP(Sec/SPI): 0.004681
  • TAT(Tat/SPI): 0.000279
  • LIPO(Sec/SPII): 0.000605
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI:
• RefSeq: WP_001548909 NCBI
• UniProt:

⊟Protein sequence

• MDGRIPINVWTGDSIARSGRGTLIKLNLENLDALSKLITGETSGMLAECVIFLNESFNISENENKNFADRKKQLSEGFKDKINLFQLEEMERTLISKINSLEEVADETIESISAVKHLLPDFALDALKERINELFKGIKSFIEKVYDSIDNEILEIFKNIDHDFRDGVSEEMMKHLKVVKQNIDQIKNQNDIYGRQIADIRSIMKQQDATILDGNFQINCSGENMVQGLVIPSNYLGRKMKILKDHIDDGIKKIADYVQGIYDEYASKIVDVIKYLINTIPKIRKNLRHAIEMLNVKKKEFLSLIPNVTCNYIKTKLEELDNTLGKWEPFLNDLKAVSPILDNHLDDIVKNMKPLIVQMIFEPSHYDDMFISRKALTPVFSSVL

⊟Experimental data

• experimentally validated:
• protein localization:
• quantitative data / protein copy number per cell:
• interaction partners:

⊟Expression & Regulation

⊟Operon

⊟Regulation

• regulator:

⊟Transcription pattern

• S.aureus Expression Data Browser: no data available

⊟Protein synthesis (provided by Aureolib)

• Aureolib: no data available

⊟Protein stability

• half-life: no data available

⊟Biological Material

⊟Mutants

⊟Expression vector

⊟lacZ fusion

⊟GFP fusion

⊟two-hybrid system

⊟FLAG-tag construct

⊟Antibody

⊟Other Information

You are kindly invited to share additional interesting facts.

⊟Literature

⊟References

⊟Relevant publications