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COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40
NCBI: 23-MAY-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus USA300_FPR3757
- locus tag: SAUSA300_pUSA030002 [new locus tag: SAUSA300_RS14745 ]
- pan locus tag?:
- symbol: SAUSA300_pUSA030002
- pan gene symbol?: —
- synonym:
- product: IS431mec-like transposase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SAUSA300_pUSA030002 [new locus tag: SAUSA300_RS14745 ]
- symbol: SAUSA300_pUSA030002
- product: IS431mec-like transposase
- replicon: pUSA03
- strand: +
- coordinates: 1179..1853
- length: 675
- essential: unknown
⊟Accession numbers[edit | edit source]
- Gene ID: 3912725 NCBI
- RefSeq: YP_492688 NCBI
- BioCyc: see SAUSA300_RS14745
- MicrobesOnline: 1291481 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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661ATGAACTATTTCAGATATAAACAATTTAACAAGGATGTTATCACTGTAGCCGTTGGCTAC
TATCTAAGATATGCATTGAGCTATCGTGATATATCTGAAATATTAAGAGAACGTGGTGTA
AACGTTCATCATTCAACGATCTACCGTTGGGTTCAAGAATATGCCCCAATTTTATATCAA
ATTTGGAAGAAAAAGCATAAAAAAGCTTATTACAAATGGCGTATTGATGAGACGTATATC
AAAATAAAAGGAAAATGGAGCTATTTATATCGTGCCATTGATACAGAGGGACATACATTA
GATATTTGGTTGCGTAAGCAACGAGATAATCATTCAGCATATGCGTTTATCAAACGTCTC
ATTAAACAATTTGGTAAGCCTCAAAAGGTAGTTACAGATCAGGCACCTTCAACGAAGGCA
GCAATGGCTAAAATAATTAAAGCTTTTAAACTTAAACCTGACTGTCATTGTACATCGAAA
TATCTGAATAACCTCATTGAGCAAGATCACCGTCATATTAAAGTAAGAAAGACAAGATAT
CAAAGTATCAATACGGCAAAGAATACTTTAAAAGGTATTGAATGTATTTACGCTCTATAT
AAAAAGAACCGTAGGTCTCTTCAGATCTACGGATTTTCCCCATGCCACGAAATTAGCATC
ATGCTAGCAAGTTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SAUSA300_pUSA030002 [new locus tag: SAUSA300_RS14745 ]
- symbol: SAUSA300_pUSA030002
- description: IS431mec-like transposase
- length: 224
- theoretical pI: 10.427
- theoretical MW: 26901.2
- GRAVY: -0.610714
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED :
- IS431mec-like transposase
- ⊞PFAM: RNase_H (CL0219) DDE_Tnp_IS240; DDE domain (PF13610; HMM-score: 134.2)and 15 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILRERGVNVHHSTIYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDTEGHTLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVVTDQAPSTKAAMAKIIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available