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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS01815 [old locus tag: SA0315 ]
  • pan locus tag?: SAUPAN001858000
  • symbol: SA_RS01815
  • pan gene symbol?: sirTM
  • synonym:
  • product: deacetylase SIR2

⊟Additional information (user-provided)[edit | edit source]

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA_RS01815 [old locus tag: SA0315 ]
  • symbol: SA_RS01815
  • product: deacetylase SIR2
  • replicon: chromosome
  • strand: +
  • coordinates: 372334..373278
  • length: 945
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_002745 (372334..373278) NCBI
  • BioCyc: SA_RS01815 BioCyc
  • MicrobesOnline: see SA0315

⊟Phenotype[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGCAGAGTAGTAAATGGAATGCAATGTCTCTTTTAATGGATGAAAAGACAAAGCAGGCT
    GAAGTATTGCGTACTGCGATTGATGAAGCAGATGCGATAGTGATTGGAATTGGTGCAGGC
    ATGTCTGCATCTGACGGATTTACATATGTAGGAGAGCGTTTTACGGAAAATTTCCCAGAT
    TTTATTGAAAAATATCGCTTCTTTGATATGTTGCAAGCGAGTTTACATCCTTATGGCAGT
    TGGCAAGAGTATTGGGCATTTGAGAGTCGTTTTATTACATTAAATTATTTAGATCAACCT
    GTAGGTCAGTCTTATCTCGCATTAAAATCCTTAGTGGAAGGTAAACAGTACCATATCATA
    ACTACGAATGCAGACAATGCTTTCGATGCTGCTGAATATGATATGACTCATGTATTTCAT
    ATACAAGGGGAGTATATACTGCAACAGTGTAGTCAGCATTGTCATGCTCAAACGTATCGC
    AATGATGATTTAATTCGTAAAATGGTTGTTGCGCAACAAGATATGCTTATACCTTGGGAG
    ATGATTCCAAGATGTCCAAAATGTGATGCTCCAATGGAAGTGAATAAACGTAAAGCGGAA
    GTTGGCATGGTTGAAGATGCTGAATTTCATGCGCAACTACAACGTTATAATGCTTTTCTA
    GAGCAACATCAAGATGATAAAGTGTTGTATTTGGAAATTGGAATTGGTTATACTACACCA
    CAATTTGTGAAGCATCCTTTTCAGCGTATGACACGTAAAAATGAAAATGCAATTTATATG
    ACGATGAATAAAAAGGCATATCGCATTCCGAATTCAATTCAAGAACGTACCATACATTTA
    ACTGAGGATATCTCAACATTGATTACAACAGCACTCCGGAACGACAGTACAACGCAAAAT
    AACAACATTGGAGAGACAGAAGATGTACTTAATAGAACCGATTAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    945


⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA_RS01815 [old locus tag: SA0315 ]
  • symbol: SA_RS01815
  • description: deacetylase SIR2
  • length: 314
  • theoretical pI: 4.9838
  • theoretical MW: 36417.9
  • GRAVY: -0.518471

⊟Function[edit | edit source]

  • TIGRFAM:
    molybdenum cofactor synthesis domain (TIGR00177; HMM-score: 15.4)
  • TheSEED: see SA0315
  • PFAM:

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.9901
    • Cytoplasmic Membrane Score: 0.0021
    • Cell wall & surface Score: 0
    • Extracellular Score: 0.0078
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.009456
    • TAT(Tat/SPI): 0.000605
    • LIPO(Sec/SPII): 0.001294
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MQSSKWNAMSLLMDEKTKQAEVLRTAIDEADAIVIGIGAGMSASDGFTYVGERFTENFPDFIEKYRFFDMLQASLHPYGSWQEYWAFESRFITLNYLDQPVGQSYLALKSLVEGKQYHIITTNADNAFDAAEYDMTHVFHIQGEYILQQCSQHCHAQTYRNDDLIRKMVVAQQDMLIPWEMIPRCPKCDAPMEVNKRKAEVGMVEDAEFHAQLQRYNAFLEQHQDDKVLYLEIGIGYTTPQFVKHPFQRMTRKNENAIYMTMNKKAYRIPNSIQERTIHLTEDISTLITTALRNDSTTQNNNIGETEDVLNRTD

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Additional information (user-provided)[edit | edit source]

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Additional information (user-provided)[edit | edit source]

⊟Other information (user-provided)[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]


⊟Relevant publications[edit | edit source]

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