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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS03675 [old locus tag: SA0643 ]
- pan locus tag?: SAUPAN002572000
- symbol: SA_RS03675
- pan gene symbol?: —
- synonym:
- product: aldo/keto reductase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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901ATGGAACAAATAATGATTAATCACTATGTTCATTTTTCTAGGCTTGTACAAGGTTTTTGG
CGTGCAAATGAATGGAAGATGACTGCGAAAGAGTTAAATTATTTTATAAATGAATTAGTT
GAACGTGGAATTACAACGATGGATCATGCTGATATTTATGGGGATTATCAATGTGAATCA
CTGTTTGGTAATGCTTTGGATTTATCACCCGAATTAAGAAATAAAATTCAAATTGTTACG
AAATGTGGTATCATTTTGCCTTCTAAGCAATTTGATTTTACAAATGGACATCGTTATGAT
TTGAGTAGTAAGCACATCGTGAAATCTGTTGAACAGTCATTAATCAATTTGAATGTAGAT
TATTTAGATAGTCTACTCATTCATCGTCCTTCACCATTGATGGATCCAGAACAAGTTGCT
GATGCATTAACTAAACTTGTTAAACAAGGTAAGTTGAAGTCATTCGGGGTGTCGAATTTT
AATCATTCACAATACCAATTGTTAAATCAATATATTATGAAAGAAAGACTACATATTAGC
ATCAATCAATTAGAATTATCGCCATATCACGTTGATAGTTTACAAGATGGAACAATGGAT
TCAATGTATCAAAACCATGTTCAAATTATGGCTTGGAGTCCTTTTGCAGGCGGTAAAATT
TTCGACAAGGAAGATATTAAAGCGCAACGTATTATGAAAGTTGTTCAATCAATAGCTGAC
AAATATGGTGTGAGTGACACAGCTGTGATGATAGCATGGTTAGTAAAAATACCGCATAGT
ATCATGCCGATACTTGGAACAAGTCAGTTAAAGCGTATTGATCAAGCAATCGAAGGGCTA
CAACTTAATTTAGATGATCAGTCGTGGTTTGACATTTACACCGCTATTATCGGACAAGAT
ATTCCGTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA_RS03675 [old locus tag: SA0643 ]
- symbol: SA_RS03675
- description: aldo/keto reductase
- length: 302
- theoretical pI: 6.28368
- theoretical MW: 34707.7
- GRAVY: -0.215563
⊟Function[edit | edit source]
- TIGRFAM: voltage-dependent potassium channel beta subunit (TIGR01293; HMM-score: 70.9)and 1 moreCentral intermediary metabolism Polyamine biosynthesis carboxynorspermidine decarboxylase (TIGR01047; HMM-score: 13.7)
- TheSEED: see SA0643
- PFAM: TIM_barrel (CL0036) Aldo_ket_red; Aldo/keto reductase family (PF00248; HMM-score: 178.2)and 1 moreYqgF (CL0580) YqgF; Holliday-junction resolvase-like of SPT6 (PF14639; HMM-score: 12.6)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.9848
- Cytoplasmic Membrane Score: 0.0063
- Cell wall & surface Score: 0
- Extracellular Score: 0.0089
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.005208
- TAT(Tat/SPI): 0.000211
- LIPO(Sec/SPII): 0.000612
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MEQIMINHYVHFSRLVQGFWRANEWKMTAKELNYFINELVERGITTMDHADIYGDYQCESLFGNALDLSPELRNKIQIVTKCGIILPSKQFDFTNGHRYDLSSKHIVKSVEQSLINLNVDYLDSLLIHRPSPLMDPEQVADALTKLVKQGKLKSFGVSNFNHSQYQLLNQYIMKERLHISINQLELSPYHVDSLQDGTMDSMYQNHVQIMAWSPFAGGKIFDKEDIKAQRIMKVVQSIADKYGVSDTAVMIAWLVKIPHSIMPILGTSQLKRIDQAIEGLQLNLDDQSWFDIYTAIIGQDIP
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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