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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS04375 [old locus tag: SAS022 ]
- pan locus tag?: SAUPAN002830000
- symbol: SA_RS04375
- pan gene symbol?: truncated-SA
- synonym:
- product: hypothetical protein
⊟Additional information (user-provided)[edit | edit source]
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA_RS04375 [old locus tag: SAS022 ]
- symbol: SA_RS04375
- product: hypothetical protein
- replicon: chromosome
- strand: +
- coordinates: 873589..873876
- length: 288
- essential: no DEG
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
⊟Additional information (user-provided)[edit | edit source]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241ATGTTTGGTGGATATGATGAATTAATGGAACCTGTGTGTAACACATTTACTGCTAAGGAG
CCATTTAATCAACTTGGTGGTTATCCATATTTTGACCAAATAGATCCAAGAACGAACGAT
CAAGAACTGAAAATGTATGATAGAGTCTTACTGCAAATTGATTCTACAAGAGATGGTAAT
TCTTCGATTATATGGGGTGATTTAGGTATTGCCAATATCTTAGTGAAATCTACTGACCTT
GAGGCTATGAAGTTTGATGATTACATGTATTCATGGGATTGCAGCTAA60
120
180
240
288
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA_RS04375 [old locus tag: SAS022 ]
- symbol: SA_RS04375
- description: hypothetical protein
- length: 95
- theoretical pI: 3.84053
- theoretical MW: 10969.2
- GRAVY: -0.455789
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SAS022
- PFAM: no clan defined DUF1963; Domain of unknown function (DUF1963) (PF09234; HMM-score: 84.3)and 1 morePKinase (CL0016) EcKL; Ecdysteroid kinase-like family (PF02958; HMM-score: 11.7)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.5343
- Cytoplasmic Membrane Score: 0.0477
- Cell wall & surface Score: 0.0012
- Extracellular Score: 0.4169
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.008658
- TAT(Tat/SPI): 0.000397
- LIPO(Sec/SPII): 0.001778
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Additional information (user-provided)[edit | edit source]
⊟Protein sequence[edit | edit source]
- MFGGYDELMEPVCNTFTAKEPFNQLGGYPYFDQIDPRTNDQELKMYDRVLLQIDSTRDGNSSIIWGDLGIANILVKSTDLEAMKFDDYMYSWDCS
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Additional information (user-provided)[edit | edit source]
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Additional information (user-provided)[edit | edit source]
⊟Other information (user-provided)[edit | edit source]
You can add further information about the gene and protein here. [edit]
⊟Literature[edit | edit source]
⊟References[edit | edit source]