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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS07595 [old locus tag: SA1340 ]
  • pan locus tag?: SAUPAN004046000
  • symbol: SA_RS07595
  • pan gene symbol?: —
  • synonym:
  • product: glyoxalase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA_RS07595 [old locus tag: SA1340 ]
  • symbol: SA_RS07595
  • product: glyoxalase
  • replicon: chromosome
  • strand: -
  • coordinates: 1548191..1548562
  • length: 372
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_002745 (1548191..1548562) NCBI
  • BioCyc: SA_RS07595 BioCyc
  • MicrobesOnline: see SA1340

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    ATGGAAAAGTTAAATCAAGTTATGTTATATGTTGATGATGTTGAAAAAGCGAAAGCATTT
    TGGACAGAAACTTTAGAATTTGTTGTTGTAAGTGAAACACCGTTAGCTGAGGACTATGTT
    GCAGTTGAAGTATCACCTACCAAAGATGCTGAAACGTCATTGACGATTATGGCAAAAGAA
    TTTATTGAAAAGCATAGTCCAGAGGTGAACCTAGGAACACCATCTTTAATGTTTAAAGAG
    AAAAACTTTGATGCATTATACTCAAAATTAAATGATTTAGGTTTAACTGGGCATGATATA
    GTAGAAATGGATGGTCAACGTGTATTTAATTTCCAAGATGGACAAGGTAATTATTTTGCA
    GTTAGTGACTAA
    60
    120
    180
    240
    300
    360
    372

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA_RS07595 [old locus tag: SA1340 ]
  • symbol: SA_RS07595
  • description: glyoxalase
  • length: 123
  • theoretical pI: 4.07023
  • theoretical MW: 13891.5
  • GRAVY: -0.255285

⊟Function[edit | edit source]

  • TIGRFAM:
    methylmalonyl-CoA epimerase (TIGR03081; EC 5.1.99.1; HMM-score: 16.4)
  • TheSEED: see SA1340
  • PFAM:
    Glyoxalase (CL0104) Glyoxalase; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily (PF00903; HMM-score: 31.5)
    Glyoxalase_2; Glyoxalase-like domain (PF12681; HMM-score: 25.5)
    and 2 more
    Glyoxalase_4; Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily (PF13669; HMM-score: 16.2)
    no clan defined DUF2481; Protein of unknown function (DUF2481) (PF10654; HMM-score: 12.2)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.005495
    • TAT(Tat/SPI): 0.000318
    • LIPO(Sec/SPII): 0.000432
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MEKLNQVMLYVDDVEKAKAFWTETLEFVVVSETPLAEDYVAVEVSPTKDAETSLTIMAKEFIEKHSPEVNLGTPSLMFKEKNFDALYSKLNDLGLTGHDIVEMDGQRVFNFQDGQGNYFAVSD

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell: data available for COL
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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