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NCBI: 02-MAR-2017

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS08775 [old locus tag: SA1556 ]
  • pan locus tag?: SAUPAN004399000
  • symbol: SA_RS08775
  • pan gene symbol?: acuC
  • synonym:
  • product: acetoin utilization protein AcuC

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA_RS08775 [old locus tag: SA1556 ]
  • symbol: SA_RS08775
  • product: acetoin utilization protein AcuC
  • replicon: chromosome
  • strand: +
  • coordinates: 1782927..1784096
  • length: 1170
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

  • Location: NC_002745 (1782927..1784096) NCBI
  • BioCyc: SA_RS08775 BioCyc
  • MicrobesOnline: see SA1556

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGCAACAACATTCATCAAAAACTGCATATGTTTATTCAGATAAGTTATTACAATATCGA
    TTTCATGACCAACATCCCTTCAATCAAATGCGTTTAAAATTAACAACAGAGCTACTTTTG
    AATGCAAATTTATTGTCTCCAGAACAAATAGTACAACCTAGAATTGCAACAGGTGACGAA
    TTAATGTTAATTCATAAATATGATTACGTCGAAGCTATTAAGCATGCTTCACATGGCATT
    ATCAGTGAAGATGAGGCTAAGAAATATGGATTAAATGATGAAGAGAATGGTCAATTTAAG
    CATATGCACCGCCATAGTGCCACAATTGTTGGAGGCGCTTTAACTTTAGCAGATCTTATT
    ATGTCAGGCAAAGTATTAAATGGTTGTCACTTAGGTGGTGGTTTGCATCACGCTCAACCT
    GGTCGAGCAAGTGGTTTTTGTATATACAATGATATTGCAATTACCGCACAATACATAGCT
    AAAGAATACAATCAACGCGTTTTAATCATAGATACCGATGCACATCATGGAGATGGTACA
    CAATGGAGTTTCTATGCCGATAACCATGTTACTACTTATTCTATCCATGAAACCGGAAAG
    TTTCTTTTCCCAGGCTCTGGTCACTATACTGAACGCGGTGAAGATATCGGCTATGGACAC
    ACTGTAAATGTCCCACTTGAACCGTATACAGAAGATGCATCATTTTTGGAGTGTTTTAAA
    TTAACAGTTGAGCCTGTCGTAAAGAGTTTTAAACCTGATATTATTCTAAGCGTAAATGGT
    GTCGATATACATTATCGTGATCCACTAACTCATCTAAATTGTACGTTACATTCATTATAT
    GAAATTCCATATTTTGTAAAATATTTAGCTGATTCTTATACGAATGGAAAGGTAATTATG
    TTTGGTGGCGGAGGCTACAATATTTGGAGAGTCGTACCACGTGCATGGAGTCATGTATTC
    TTAAGTTTAATTGATCAACCAATTCAAAGTGGTTATTTACCGTTAGAATGGATTAATAAA
    TGGAAACATTATTCATCTGAATTATTACCTAAAAGATGGGAAGATCGTTTAAATGATTAT
    ACCTATGTCCCCCGCACAAAAGAAATTAGTGAAAAAAATAAAAAATTAGCTTTACATATA
    GCGAGTTGGTACGAATCTACTCGTCAATAA
    60
    120
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    840
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    1020
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    1140
    1170

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA_RS08775 [old locus tag: SA1556 ]
  • symbol: SA_RS08775
  • description: acetoin utilization protein AcuC
  • length: 389
  • theoretical pI: 6.87927
  • theoretical MW: 44571.1
  • GRAVY: -0.413882

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: see SA1556
  • PFAM:
    Arginase (CL0302) Hist_deacetyl; Histone deacetylase domain (PF00850; HMM-score: 244.2)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.004263
    • TAT(Tat/SPI): 0.00024
    • LIPO(Sec/SPII): 0.00038
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MQQHSSKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATGDELMLIHKYDYVEAIKHASHGIISEDEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMSGKVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYIAKEYNQRVLIIDTDAHHGDGTQWSFYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTVEPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGGGGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKWKHYSSELLPKRWEDRLNDYTYVPRTKEISEKNKKLALHIASWYESTRQ

⊟Experimental data[edit | edit source]

  • experimentally validated: data available for COL, NCTC8325
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator: CcpA, CodY see SA1556

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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