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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS09265 [old locus tag: SA1647 ]
- pan locus tag?: SAUPAN004616000
- symbol: SA_RS09265
- pan gene symbol?: sem
- synonym:
- product: exotoxin
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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661ATGAAAAGAATACTTATCATTGTTGTTTTATTGTTTTGCTATTCGCAAAATCATATCGCA
ACCGCTGATGTCGGAGTTTTGAATCTTAGGAACTATTATGGTAGCTATCCAATTGAAGAC
CACCAAAGTATTAATCCTGAAAATAATCATCTTTCGCATCAATTAGTTTTTTCTATGGAT
AATTCGACAGTAACAGCTGAATTTAAGAACGTTGATGATGTAAAGAAATTCAAAAATCAT
GCTGTAGATGTATATGGTCTAAGTTATAGTGGATATTGTTTGAAAAACAAATATATATAC
GGTGGAGTTACATTAGCAGGTGATTATTTAGAGAAATCTAGACGTATTCCTATTAATCTT
TGGGTTAATGGAGAACATCAAACTATATCTACTGACAAAGTATCAACTAATAAAAAGTTA
GTAACAGCTCAAGAAATTGATACTAAATTAAGAAGATATCTACAAGAAGAATATAATATT
TATGGCTTTAATGATACAAATAAAGGAAGAAATTATGGTAATAAGTCAAAATTTAGTTCT
GGATTTAATGCAGGAAAAATATTATTTCATTTGAATGATGGTTCATCATTTTCTTATGAC
TTATTTGATACTGGAACAGGACAAGCTGAAAGTTTCTTAAAAATATATAATGACAACAAA
ACTGTCGAAACTGAAAAATTCCATTTAGATGTAGAAATATCTTATAAGGACGAAAGTTGA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA_RS09265 [old locus tag: SA1647 ]
- symbol: SA_RS09265
- description: exotoxin
- length: 239
- theoretical pI: 6.95956
- theoretical MW: 27370.4
- GRAVY: -0.546444
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SA1647
- PFAM: Ant-toxin_C (CL0386) Stap_Strp_tox_C; Staphylococcal/Streptococcal toxin, beta-grasp domain (PF02876; HMM-score: 122.5)and 3 moreOB_enterotoxin (CL0658) Stap_Strp_toxin; Staphylococcal/Streptococcal toxin, OB-fold domain (PF01123; HMM-score: 29.8)ABC-2 (CL0181) ABC2_membrane_3; ABC-2 family transporter protein (PF12698; HMM-score: 16)no clan defined POC3_POC4; 20S proteasome chaperone assembly proteins 3 and 4 (PF10448; HMM-score: 13.5)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Extracellular
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 0
- Cellwall Score: 0
- Extracellular Score: 10
- Internal Helices: 0
- LocateP:
- SignalP: Signal peptide SP(Sec/SPI) length 22 aa
- SP(Sec/SPI): 0.975241
- TAT(Tat/SPI): 0.00072
- LIPO(Sec/SPII): 0.010489
- Cleavage Site: CS pos: 22-23. ATA-DV. Pr: 0.9117
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKRILIIVVLLFCYSQNHIATADVGVLNLRNYYGSYPIEDHQSINPENNHLSHQLVFSMDNSTVTAEFKNVDDVKKFKNHAVDVYGLSYSGYCLKNKYIYGGVTLAGDYLEKSRRIPINLWVNGEHQTISTDKVSTNKKLVTAQEIDTKLRRYLQEEYNIYGFNDTNKGRNYGNKSKFSSGFNAGKILFHLNDGSSFSYDLFDTGTGQAESFLKIYNDNKTVETEKFHLDVEISYKDES
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.