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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS10390 [old locus tag: SA1808 ]
- pan locus tag?: SAUPAN005162000
- symbol: SA_RS10390
- pan gene symbol?: —
- synonym:
- product: glycosyl transferase family A
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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961ATGAAAAAAGTAAGTGTTATAATGCCAACATTCAATAACGGCGAAAAATTACATAGAACC
ATTAGTTCTGTATTAAATCAAACAATGAAGAGTACTGATTACGAATTAATTATTATTGAT
GATCATTCAAATGACAATGGTGAGACTTTGAATGTTATAAAAAAATATAAAGGATTAGTT
CGTTTTAAACAATTAAAAAAGAATAGTGGAAATGCTAGCGTACCTAGAAATACAGGCTTA
AAAATGAGCAAAGCTGAATATGTATTCTTTTTAGATTCTGATGATTTACTTCACGAAAGA
GCACTAGAAGATTTATATAATTACGGCAAAGAAAATAATAGCGATTTAATAATTGGAAAA
TATGGAGTTGAAGGTAAAGGAAGAAGTGTTCCTAAAGCTATATTTGAGAAAGGAAATGTA
GCGAAAGCTGATATTATTGATAATAGTATTTTTTATGCTTTATCAGTACTAAAAATGTTT
AAAAAAAGTGTTATAGATAAAAACAAGATAAAATTCAAAACATTCTCTAAAACTGCTGAA
GACCAATTATTTACTATAGAATTTTTGATGAATTCGAAAAATTACTCGATAAAAACCGAC
TATGAATACTATATTGTAGTCAACGATTTCGAGTCTAGCAATCATTTGTCAGTAAATAAA
AGTACAGGAAATCAATATTTTGCTACTATAAACGAAATTTATAAAGCTATTTATAAAAGT
CCAATTTATAAAAACCAAGAAAAAAGACACCAACTTGCCGGGAAGTATACAACTAGACTT
TTAAGACACGGTCAGAAAAAGAATTTTGCAAATAGTAAAATGAAATATGAAGATAAAATC
GAATGGTTAAACAACTTTTCTAAAACAATTAATAAAGTACCTAGAGACTCAGATAAATAT
GTCACACAAATATTCAACTTAAAATTAGAAGCAATAAGACAAAACGATTTATTAGCTGTG
ATGATTGCAGATAAGCTATTATAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA_RS10390 [old locus tag: SA1808 ]
- symbol: SA_RS10390
- description: glycosyl transferase family A
- length: 327
- theoretical pI: 10.0446
- theoretical MW: 37812.1
- GRAVY: -0.576147
⊟Function[edit | edit source]
- TIGRFAM: poly-beta-1,6 N-acetyl-D-glucosamine synthase (TIGR03937; EC 2.4.1.-; HMM-score: 57.2)and 8 moremycofactocin system glycosyltransferase (TIGR03965; HMM-score: 45.5)putative glycosyltransferase, exosortase G-associated (TIGR03111; HMM-score: 36.7)colanic acid biosynthesis glycosyltransferase WcaA (TIGR04017; EC 2.4.-.-; HMM-score: 36.3)Unknown function Enzymes of unknown specificity transferase 2, rSAM/selenodomain-associated (TIGR04283; EC 2.-.-.-; HMM-score: 35.5)colanic acid biosynthesis glycosyltransferase WcaE (TIGR04009; EC 2.4.-.-; HMM-score: 32.8)chitooligosaccharide synthase NodC (TIGR04242; EC 2.4.1.-; HMM-score: 26.4)glycosyltransferase, TIGR04182 family (TIGR04182; HMM-score: 20.7)hopene-associated glycosyltransferase HpnB (TIGR03469; HMM-score: 20.5)
- TheSEED: see SA1808
- PFAM: GT-A (CL0110) Glycos_transf_2; Glycosyl transferase family 2 (PF00535; HMM-score: 86)and 3 moreGlyco_tranf_2_2; Glycosyltransferase like family 2 (PF10111; HMM-score: 37.1)Glyco_tranf_2_3; Glycosyltransferase like family 2 (PF13641; HMM-score: 36.4)Glyco_tranf_2_4; Glycosyl transferase family 2 (PF13704; HMM-score: 16.4)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0.17
- Cytoplasmic Membrane Score: 9.51
- Cellwall Score: 0.16
- Extracellular Score: 0.15
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.006692
- TAT(Tat/SPI): 0.000221
- LIPO(Sec/SPII): 0.000873
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MKKVSVIMPTFNNGEKLHRTISSVLNQTMKSTDYELIIIDDHSNDNGETLNVIKKYKGLVRFKQLKKNSGNASVPRNTGLKMSKAEYVFFLDSDDLLHERALEDLYNYGKENNSDLIIGKYGVEGKGRSVPKAIFEKGNVAKADIIDNSIFYALSVLKMFKKSVIDKNKIKFKTFSKTAEDQLFTIEFLMNSKNYSIKTDYEYYIVVNDFESSNHLSVNKSTGNQYFATINEIYKAIYKSPIYKNQEKRHQLAGKYTTRLLRHGQKKNFANSKMKYEDKIEWLNNFSKTINKVPRDSDKYVTQIFNLKLEAIRQNDLLAVMIADKLL
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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