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NCBI: 02-MAR-2017
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA_RS10495 [old locus tag: SA1829 ]
- pan locus tag?: SAUPAN005229000
- symbol: SA_RS10495
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
⊟Accession numbers[edit | edit source]
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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841ATGAATGAAATTAAATTAGAATATGACACACATGTTTCAGTGGTACATTATGAAAGTTTA
GACTCACGTTCATTTAAGAGCTTTTCAAAACCTGAATGGAGTAAGTTGGTTAATAAACTG
TCTGTGCCTATAGAAGCGAATTATAAGTATGCACGTGGTGTTGCTGTGTACGGTGATATT
AAAGACGGTGCAAATGATCATGGTGAAACAATAAAAAAGCATCGCAATGACGTTAATGTC
ATATACAGAGATGTGATTGTACTTGATTATGATGAAATAAATGATTTAAAGCAATTACAT
GAAGCAATCAGCTCAGTTTTAAGCAGTGTTGCATGGTATTGGCACACATCGTTTAGCCAT
ACAACTGAACAAGCTAGAATACGCCTATATATCCCTCTGAATGAGCGAATAAGTGCAGAT
GATTATCGTAAATATACAAAAGTATTAGCAAATAAAATTGGCCATAAAGTGGATGAAGGT
TCATATCAGCCAAGTAGATGTTTTGCGTTACCAGTTATTCAAAAAGGACACATATTTATT
AAGCGAGTGAATGACTGTCCAATTATGAATGTTGATATGCTCGAACAGTGGTCGAAGGAG
TTTGAACAATCAAATGCTAGTCCTAATGTCATAGGATACACTCGACGCGATAGTGAGTAC
TGGCGCGAGCTATGCTTTGGAACAACCGAAGGCAATCGTAACAATGCACTAGCTAGCTTA
ATTGGGCATTTATTGAGATGTCACGTTAATGATTATATTGTTTATTCATTTGCTTTATTA
TGGGGACAATTCGCATGTAAACCACCTATGAAAGAACAAGAAATCAACGCTACTTTTCAA
TCGATATTAAATAAACACTATAACAATTAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA_RS10495 [old locus tag: SA1829 ]
- symbol: SA_RS10495
- description: hypothetical protein
- length: 289
- theoretical pI: 7.37067
- theoretical MW: 33563.7
- GRAVY: -0.513495
⊟Function[edit | edit source]
- TIGRFAM: DNA ligase D, polymerase domain (TIGR02778; HMM-score: 16.1)
- TheSEED: see SA1829
- PFAM: no clan defined PriCT_1; Primase C terminal 1 (PriCT-1) (PF08708; HMM-score: 38.2)and 1 moreDMT (CL0184) DMT_6; Putative member of DMT superfamily (DUF486) (PF04342; HMM-score: 12.2)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- LocateP:
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.00777
- TAT(Tat/SPI): 0.00112
- LIPO(Sec/SPII): 0.001141
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MNEIKLEYDTHVSVVHYESLDSRSFKSFSKPEWSKLVNKLSVPIEANYKYARGVAVYGDIKDGANDHGETIKKHRNDVNVIYRDVIVLDYDEINDLKQLHEAISSVLSSVAWYWHTSFSHTTEQARIRLYIPLNERISADDYRKYTKVLANKIGHKVDEGSYQPSRCFALPVIQKGHIFIKRVNDCPIMNVDMLEQWSKEFEQSNASPNVIGYTRRDSEYWRELCFGTTEGNRNNALASLIGHLLRCHVNDYIVYSFALLWGQFACKPPMKEQEINATFQSILNKHYNN
⊟Experimental data[edit | edit source]
- experimentally validated:
- protein localization:
- quantitative data / protein copy number per cell:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: no data available
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.