From AureoWiki
Jump to navigation Jump to search

NCBI: 02-MAR-2017

Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA_RS14160 [old locus tag: SA2474 ]
  • pan locus tag?: SAUPAN006438000
  • symbol: SA_RS14160
  • pan gene symbol?:
  • synonym:
  • product: N-acetyltransferase

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: CDS
  • locus tag: SA_RS14160 [old locus tag: SA2474 ]
  • symbol: SA_RS14160
  • product: N-acetyltransferase
  • replicon: chromosome
  • strand: -
  • coordinates: 2785853..2786350
  • length: 498
  • essential: no DEG other strains

Accession numbers[edit | edit source]

  • Location: NC_002745 (2785853..2786350) NCBI
  • BioCyc: SA_RS14160 BioCyc
  • MicrobesOnline: see SA2474

Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    ATGATAAATACTGAAAGATTAAATTTAATGATTCCAAGTTCCTCGCATTTAATTGAACTT
    TATAATATTTGTAGTCATCCACAAGCAAATATATACACTCCCAAAGGTTTACATAATTCC
    AAATTAGACACACAACGGTGGATTGAAAAATGGCAAAACCATTGGCAACAATATCAATTT
    GGTTACTTTGTATTGGTGAAAAAAATAGATTGTAGTGTTATTGGTATTTGTGGATATGAA
    TATCGACAATTAAAGCAAGAAACAGTACTAAATTTATTTTATAAATTACATCCAAGTTTT
    GAAGGACAAGGGTACGCATGTGAGGCTATTACAGCAATCACAAATTTTGTGAATTATATC
    GATCAAGAAACAGTAAAAGTTATCAGGACAAATAAGTGTAACCAACGTTCAATAAATTTA
    GCAGAAAGGCTTAAATTCAAGCGAGACAAAGCTATGGACGACATTATCAATCAAGGAGAT
    ATTGTGTTTTATAAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    498

Protein[edit | edit source]

General[edit | edit source]

  • locus tag: SA_RS14160 [old locus tag: SA2474 ]
  • symbol: SA_RS14160
  • description: N-acetyltransferase
  • length: 165
  • theoretical pI: 8.6825
  • theoretical MW: 19489.3
  • GRAVY: -0.427273

Function[edit | edit source]

  • TIGRFAM:
  • TheSEED: see SA2474
  • PFAM:
    Acetyltrans (CL0257) Acetyltransf_3; Acetyltransferase (GNAT) domain (PF13302; HMM-score: 66.4)
    and 2 more
    Acetyltransf_1; Acetyltransferase (GNAT) family (PF00583; HMM-score: 22.4)
    FR47; FR47-like protein (PF08445; HMM-score: 15.9)

Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

Localization[edit | edit source]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helices: 0
  • LocateP:
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.0245
    • TAT(Tat/SPI): 0.002741
    • LIPO(Sec/SPII): 0.016022
  • predicted transmembrane helices (TMHMM): 0

Accession numbers[edit | edit source]

Protein sequence[edit | edit source]

  • MINTERLNLMIPSSSHLIELYNICSHPQANIYTPKGLHNSKLDTQRWIEKWQNHWQQYQFGYFVLVKKIDCSVIGICGYEYRQLKQETVLNLFYKLHPSFEGQGYACEAITAITNFVNYIDQETVKVIRTNKCNQRSINLAERLKFKRDKAMDDIINQGDIVFYK

Experimental data[edit | edit source]

  • experimentally validated: data available for COL
  • protein localization: data available for COL
  • quantitative data / protein copy number per cell:
  • interaction partners:

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator:

Transcription pattern[edit | edit source]

Protein synthesis (provided by Aureolib)[edit | edit source]

Protein stability[edit | edit source]

  • half-life: no data available

Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

Relevant publications[edit | edit source]