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COLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40


Summary[edit | edit source]

  • organism: Staphylococcus aureus NCTC8325
  • locus tag: S871 [1]
  • symbol: RNAIII
  • synonym: S871
  • product: sRNA

Genome View[edit | edit source]

Gene[edit | edit source]

General[edit | edit source]

  • type: misc_RNA
  • locus tag: S871 [1]
  • symbol: RNAIII
  • product: sRNA
  • replicon: chromosome
  • strand: -
  • coordinates: 2093169..2093503
  • length: 335
  • essential: unknown

Accession numbers[edit | edit source]

  • SRD: srn_3910 SRD

Phenotype[edit | edit source]

  • Share your knowledge and add information here. [edit]

DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    GATGAATAATTAATTACTTTCATTGTAAATTTGTTATCTTCGTATAGTACTAAAAGTATG
    AGTTATTAAGCCATCCCAACTTAATAACCATGTAAAATTAGCAAGTGAGTAACATTTGCT
    AGTAGAGTTAGTTTCCTTGGACTCAGTGCTATGTATTTTTCTTAATTATCATTACAGATA
    ATTATTTCTAGCATGTAAGCTATCGTAAACAACATCGATTTATCATTATTTGATAAATAA
    AATTTTTTTCATAATTAATAACATCCCCAAAAATAGATTGAAAAAATAACTGTAAAACAT
    TCCCTTAATAATAAGTATGGTCGTGAGCCCCTCCC
    60
    120
    180
    240
    300
    335

Interactions

Expression & Regulation[edit | edit source]

Operon[edit | edit source]

Regulation[edit | edit source]

  • regulator: AgrA* (activation) regulon
    AgrA*(TF)important in Virulence, Quorum sensing;  [1]

Transcription pattern[edit | edit source]


Biological Material[edit | edit source]

Mutants[edit | edit source]

Expression vector[edit | edit source]

lacZ fusion[edit | edit source]

GFP fusion[edit | edit source]

two-hybrid system[edit | edit source]

FLAG-tag construct[edit | edit source]

Antibody[edit | edit source]

Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

Literature[edit | edit source]

References[edit | edit source]

  1. 1.0 1.1 1.2 1.3 1.4 Ulrike Mäder, Pierre Nicolas, Maren Depke, Jan Pané-Farré, Michel Debarbouille, Magdalena M van der Kooi-Pol, Cyprien Guérin, Sandra Dérozier, Aurelia Hiron, Hanne Jarmer, Aurélie Leduc, Stephan Michalik, Ewoud Reilman, Marc Schaffer, Frank Schmidt, Philippe Bessières, Philippe Noirot, Michael Hecker, Tarek Msadek, Uwe Völker, Jan Maarten van Dijl
    Staphylococcus aureus Transcriptome Architecture: From Laboratory to Infection-Mimicking Conditions.
    PLoS Genet: 2016, 12(4);e1005962
    [PubMed:27035918] [WorldCat.org] [DOI] (I e)
  2. Delphine Bronesky, Zongfu Wu, Stefano Marzi, Philippe Walter, Thomas Geissmann, Karen Moreau, François Vandenesch, Isabelle Caldelari, Pascale Romby
    Staphylococcus aureus RNAIII and Its Regulon Link Quorum Sensing, Stress Responses, Metabolic Adaptation, and Regulation of Virulence Gene Expression.
    Annu Rev Microbiol: 2016, 70;299-316
    [PubMed:27482744] [WorldCat.org] [DOI] (I p)

Relevant publications[edit | edit source]