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NCBI: 26-AUG-2013

⊟Summary[edit | edit source]

  • organism: Staphylococcus aureus N315
  • locus tag: SA1219 [new locus tag: SA_RS06925 ]
  • pan locus tag?: SAUPAN003795000
  • symbol: SA1219
  • pan gene symbol?: pstA
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SA1219 [new locus tag: SA_RS06925 ]
  • symbol: SA1219
  • product: hypothetical protein
  • replicon: chromosome
  • strand: -
  • coordinates: 1392037..1392954
  • length: 918
  • essential: no DEG other strains

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    ATGGAAACGACAGATAATAATAGACAATCACTCGTCGATCAACAACTTGTCCAAAAACAT
    TTATCATCCAGAACGGTTAAAAATAAAGTGTTCAAACTCATATTTTTAGCATGTACATTA
    TTAGGACTTGTCGTACTTATTGCGTTGTTAACTCAAACATTGATTAAAGGGGTAAGTCAT
    TTAAATTTACAGTTTTTCACTAATTTTTCTTCTTCAACACCATCTATGGCTGGCGTTAAA
    GGCGCGTTAATCGGTTCACTTTGGTTAATGTTAAGTATCATTCCATTATCAATCATCCTA
    GGAATAGGTACAGCTATATACTTAGAAGAATATGCGAAAAACAACAAATTTACTCAGTTT
    GTTAAAATCAGTATTTCCAATTTAGCTGGTGTACCATCAGTTGTATTTGGGTTATTAGGT
    TACACTTTGTTCGTTGGTGGTGCGGGGATTGAAGCCTTGAAAATGGGTAACAGTATATTG
    GCAGCAGCGCTAACAATGACCTTACTGATATTACCAATTATTATTGTTTCAAGTCAGGAA
    GCAATTAGAGCTGTACCTAACTCAGTACGCGAAGCTTCTTATGGTTTAGGTGCTAATAAA
    TGGCAAACGATAAGACGTGTTGTCTTACCAGCAGCGTTACCTGGTATTTTAACTGGATTC
    ATTTTGTCTCTTTCAAGAGCACTGGGAGAAACAGCGCCACTTGTGCTAATCGGTATACCG
    ACTATATTATTGGCAACACCTAGAAGTATATTGGATCAATTTTCAGCATTACCAATCCAA
    ATATTTACTTGGGCGAAAATGCCTCAAGAAGAATTCCAGAATGTTGCATCGGCAGGCATT
    ATCGTTTTACTAGTTATCTTAATCTTAATGAATGGCGTTGCGATTATTTTACGTAACAAA
    TTTAGTAAAAAATTCTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    918

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SA1219 [new locus tag: SA_RS06925 ]
  • symbol: SA1219
  • description: hypothetical protein
  • length: 305
  • theoretical pI: 10.7035
  • theoretical MW: 32870.1
  • GRAVY: 0.751803

⊟Function[edit | edit source]

  • TIGRFAM:
    Metabolism Transport and binding proteins Anions phosphate ABC transporter, permease protein PstA (TIGR00974; HMM-score: 303.3)
    and 13 more
    Metabolism Transport and binding proteins Anions phosphate ABC transporter, permease protein PstC (TIGR02138; HMM-score: 142.3)
    NifC-like ABC-type porter (TIGR01581; HMM-score: 49.9)
    Metabolism Transport and binding proteins Anions molybdate ABC transporter, permease protein (TIGR02141; HMM-score: 48.5)
    Metabolism Transport and binding proteins Anions sulfate ABC transporter, permease protein CysT (TIGR02139; HMM-score: 48.4)
    Metabolism Transport and binding proteins Anions sulfate ABC transporter, permease protein (TIGR00969; HMM-score: 45.1)
    2-aminoethylphosphonate ABC transport system, membrane component PhnV (TIGR03255; HMM-score: 40.5)
    2-aminoethylphosphonate ABC transporter, permease protein (TIGR03226; HMM-score: 33.4)
    Metabolism Transport and binding proteins Anions sulfate ABC transporter, permease protein CysW (TIGR02140; HMM-score: 29.7)
    Metabolism Transport and binding proteins Amino acids, peptides and amines putative 2-aminoethylphosphonate ABC transporter, permease protein (TIGR03262; HMM-score: 22.6)
    choline ABC transporter, permease protein (TIGR03416; HMM-score: 19.2)
    ectoine/hydroxyectoine ABC transporter, permease protein EhuC (TIGR03004; HMM-score: 18.9)
    Metabolism Transport and binding proteins Anions nitrate ABC transporter, permease protein (TIGR01183; HMM-score: 17.3)
    Metabolism Transport and binding proteins Anions phosphonate ABC transporter, permease protein PhnE (TIGR01097; HMM-score: 16.4)
  • TheSEED  :
    • Phosphate ABC transporter, permease protein PstA
    Phosphorus Metabolism Phosphorus Metabolism - no subcategory High affinity phosphate transporter and control of PHO regulon  Phosphate transport system permease protein PstA (TC 3.A.1.7.1)
    and 1 more
    Phosphorus Metabolism Phosphorus Metabolism - no subcategory Phosphate metabolism  Phosphate transport system permease protein PstA (TC 3.A.1.7.1)
  • PFAM:
    BPD_transp_1 (CL0404) BPD_transp_1; Binding-protein-dependent transport system inner membrane component (PF00528; HMM-score: 88.6)
    and 4 more
    no clan defined DUF3333; Domain of unknown function (DUF3333) (PF11812; HMM-score: 11.6)
    CrgA; Cell division protein CrgA (PF06781; HMM-score: 10.2)
    Piezo_RRas_bdg; Piezo non-specific cation channel, R-Ras-binding domain (PF12166; HMM-score: 9.8)
    DUF3094; Protein of unknown function (DUF3094) (PF11293; HMM-score: 9.2)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 6
  • LocateP: Multi-transmembrane
    • Prediction by SwissProt Classification: Membrane
    • Pathway Prediction: Sec-(SPI)
    • Intracellular possibility: 0.17
    • Signal peptide possibility: -0.5
    • N-terminally Anchored Score: -1
    • Predicted Cleavage Site: No CleavageSite
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.005391
    • TAT(Tat/SPI): 0.000415
    • LIPO(Sec/SPII): 0.011986
  • predicted transmembrane helices (TMHMM): 6

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • METTDNNRQSLVDQQLVQKHLSSRTVKNKVFKLIFLACTLLGLVVLIALLTQTLIKGVSHLNLQFFTNFSSSTPSMAGVKGALIGSLWLMLSIIPLSIILGIGTAIYLEEYAKNNKFTQFVKISISNLAGVPSVVFGLLGYTLFVGGAGIEALKMGNSILAAALTMTLLILPIIIVSSQEAIRAVPNSVREASYGLGANKWQTIRRVVLPAALPGILTGFILSLSRALGETAPLVLIGIPTILLATPRSILDQFSALPIQIFTWAKMPQEEFQNVASAGIIVLLVILILMNGVAIILRNKFSKKF

⊟Experimental data[edit | edit source]

  • experimentally validated:
  • protein localization:
  • quantitative data / protein copy number per cell:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription pattern[edit | edit source]

⊟Protein synthesis (provided by Aureolib)[edit | edit source]

⊟Protein stability[edit | edit source]

  • half-life: no data available

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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