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NCBI: 26-AUG-2013
⊟Summary[edit | edit source]
- organism: Staphylococcus aureus N315
- locus tag: SA1217 [new locus tag: SA_RS06915 ]
- pan locus tag?: SAUPAN003793000
- symbol: SA1217
- pan gene symbol?: phoU
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SA1217 [new locus tag: SA_RS06915 ]
- symbol: SA1217
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 1390491..1391132
- length: 642
- essential: no DEG other strains
⊟Accession numbers[edit | edit source]
- Gene ID: 1124056 NCBI
- RefSeq: NP_374498 NCBI
- BioCyc: see SA_RS06915
- MicrobesOnline: 103524 MicrobesOnline
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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601ATGGCAATAATTAGACAGCGATATCAGGAGCAACTTGATGATTTAATAAAGGAATTACGT
CGGTTAGGTGCAAATGTCTATGTGAGTATTGAAAATGGTATAAAATCATTAAGTATTGAC
GATAGAGGCTTTGCACGACAAACAGTTAAAAACGATAAACATATCAATCAATTAAATTAT
GATATTAATGAGCGAGTTATCATGTTAATTACAAAGCAACAGCCCATTGCGAGTGATTTG
CGTATGATGATTTCTTCATTAAAAATCGCCTCCGATTTAGAAAGAATAGGAGATAATGCA
TCGAGTATTGCCAATATTCGATTGCGTACAAAGATTACAGATGATTATGTGTTAACCCGT
TTAAAGACAATGGGTAAATTAGCTATGTTAATGTTAAAGGACTTAGATCAAGCATTTAAA
AAGAAAGATACCGTATTAATAAGAGAAATAATTGAGCGTGATGAAGATATCGATGACTTA
TATAGTCATATTATTAACGCAACGTATCTTATTGATAACGATCCATTTGTCGCTGCACAA
GCTCATTTAGCAGCAAGACATTTAGAACGTATTGGTGATCATATTATTAACATCGCTGAA
AGTGTTTATTTTTATTTAACAGGTACACATTACGAACAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SA1217 [new locus tag: SA_RS06915 ]
- symbol: SA1217
- description: hypothetical protein
- length: 213
- theoretical pI: 6.5234
- theoretical MW: 24619.1
- GRAVY: -0.284507
⊟Function[edit | edit source]
- TIGRFAM: Transport and binding proteins Anions phosphate transport system regulatory protein PhoU (TIGR02135; HMM-score: 225.6)Regulatory functions Other phosphate transport system regulatory protein PhoU (TIGR02135; HMM-score: 225.6)
- TheSEED :
- Phosphate transport system regulatory protein PhoU
Phosphorus Metabolism Phosphorus Metabolism - no subcategory High affinity phosphate transporter and control of PHO regulon Phosphate transport system regulatory protein PhoUand 1 more - PFAM: PhoU (CL0297) PhoU; PhoU domain (PF01895; HMM-score: 125)and 2 moreno clan defined Bclx_interact; Bcl-x interacting, BH3 domain (PF08945; HMM-score: 10)Met_repress (CL0057) SeqA_N; SeqA protein N-terminal domain (PF17206; HMM-score: 8.4)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 9.97
- Cytoplasmic Membrane Score: 0
- Cellwall Score: 0.01
- Extracellular Score: 0.02
- Internal Helices: 0
- LocateP: Intracellular
- Prediction by SwissProt Classification: Cytoplasmic
- Pathway Prediction: No pathway
- Intracellular possibility: 1
- Signal peptide possibility: -1
- N-terminally Anchored Score: -1
- Predicted Cleavage Site: No CleavageSite
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.006684
- TAT(Tat/SPI): 0.000812
- LIPO(Sec/SPII): 0.000704
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MAIIRQRYQEQLDDLIKELRRLGANVYVSIENGIKSLSIDDRGFARQTVKNDKHINQLNYDINERVIMLITKQQPIASDLRMMISSLKIASDLERIGDNASSIANIRLRTKITDDYVLTRLKTMGKLAMLMLKDLDQAFKKKDTVLIREIIERDEDIDDLYSHIINATYLIDNDPFVAAQAHLAARHLERIGDHIINIAESVYFYLTGTHYEQ
⊟Experimental data[edit | edit source]
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription pattern[edit | edit source]
- S.aureus Expression Data Browser: data available for NCTC8325
⊟Protein synthesis (provided by Aureolib)[edit | edit source]
- Aureolib: no data available
⊟Protein stability[edit | edit source]
- half-life: no data available
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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