PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN002483000
• symbol^?: —
• synonym:
• description^?: alpha/beta hydrolase

  descriptions from strain specific annotations:

  • alpha/beta hydrolase
  • alpha/beta fold family hydrolase
  • alpha/beta hydrolase fold family protein, putative
  • alpha/beta hydrolase fold family hydrolase
  • alpha/beta hydrolase fold family protein
  • Esterase
  • esterase/lipase
  • esterase or lipase
  • Hydrolase
  • hydrolase, alpha/beta hydrolase fold family
  • hypothetical esterase/lipase
  • putative esterase
  • putative esterase/lipase
• strand^?: +
• coordinates^?: 3000806..3001594
• synteny block^?: BlockID0017190
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL0671
N315:
SA0572
NCTC8325:
SAOUHSC_00619
Newman:
NWMN_0587
USA300_FPR3757:
SAUSA300_0604
04-02981:
SA2981_0592
08BA02176:
C248_0699
11819-97:
MS7_0668
6850:
RSAU_000572
71193:
ST398NM01_0696
ECT-R 2:
ECTR2_568
ED133:
SAOV_0651
ED98:
SAAV_0579
HO 5096 0412:
SAEMRSA15_05430
JH1:
SaurJH1_0653
JH9:
SaurJH9_0638
JKD6008:
SAA6008_00633
JKD6159:
SAA6159_00572
LGA251:
SARLGA251_05510
M013:
M013TW_0604
MRSA252:
SAR0624
MSHR1132:
SAMSHR1132_05590
MSSA476:
SAS0583
Mu3:
SAHV_0613
Mu50:
SAV0615
MW2:
MW0579
RF122:
SAB0568
ST398:
SAPIG0696
T0131:
SAT0131_00683
TCH60:
HMPREF0772_12571
TW20:
SATW20_06920
USA300_TCH1516:
USA300HOU_0621
VC40:
SAVC_02720

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MNKVTINPQIQLTYQIEGKGDPIILLHGLDGNLAGFEDLQHQLASSYKVLTYDLRGHGKS
  N315            MNKVTINPQIQLTYQIEGKGDPIILLHGLDGNLAGFEDLQHQLASSYKVLTYDLRGHGKS
  NCTC8325        MNKVTINPQIQLTYQIEGKGDPIILLHGLDGNLAGFEDLQHQLASSYKVLTYDLRGHGKS
  Newman          MNKVTINPQIQLTYQIEGKGDPIILLHGLDGNLAGFEDLQHQLASSYKVLTYDLRGHGKS
  USA300_FPR3757  MNKVTINPQIQLTYQIEGKGDPIILLHGLDGNLAGFEDLQHQLASSYKVLTYDLRGHGKS
                  ************************************************************
  
  COL             SKSESYDLNDHVEDLKILMEKLNIHEAHILGHDLGGVVAKLFTDKYAYRVKSLTTIASKK
  N315            SKSESYDLNDHVEDLKILMEKLNIHEAHILGHDLGGVVAKLFTDKYAYRVKSLTTIASKK
  NCTC8325        SKSESYDLNDHVEDLKILMEKLNIHEAHILGHDLGGVVAKLFTDKYAYRVKSLTTIASKK
  Newman          SKSESYDLNDHVEDLKILMEKLNIHEAHILGHDLGGVVAKLFTDKYAYRVKSLTTIASKK
  USA300_FPR3757  SKSESYDLNDHVEDLKILMEKLNIHEAHILGHDLGGVVAKLFTDKYAYRVKSLTTIASKK
                  ************************************************************
  
  COL             DDLIHSFTQLLIQYQDDIAGFNKSEAYILLFSKLFRNQEKTMKWYQKQRIYSIKSEDDSA
  N315            DDLIHSFTQLLIQYQDDIAGFNKSEAYILLFSKLFRNQEKTMKWYQKQRIYSIKSEDDSA
  NCTC8325        DDLIHSFTQLLIQYQDDIAGFNKSEAYILLFSKLFRNQEKTMKWYQKQRIYSIKSEDDSA
  Newman          DDLIHSFTQLLIQYQDDIAGFNKSEAYILLFSKLFRNQEKTMKWYQKQRIYSIKSEDDSA
  USA300_FPR3757  DDLIHSFTQLLIQYQDDIAGFNKSEAYILLFSKLFRNQEKTMKWYQKQRIYSIKSEDDSA
                  ************************************************************
  
  COL             VAIRSLILHKDEPMYLKKRTCVPTLLINGEHDPLIKDKNHFKLEAHFLNVTKKIFEHSGH
  N315            VAIRSLILHKDEPMYLKKRTCVPTLLINGEHDPLIKDKNHFKLEAHFLNVTKKIFEHSGH
  NCTC8325        VAIRSLILHKDEPMYLKKRTCVPTLLINGEHDPLIKDKNHFKLEAHFLNVTKKIFEHSGH
  Newman          VAIRSLILHKDEPMYLKKRTCVPTLLINGEHDPLIKDKNHFKLEAHFLNVTKKIFEHSGH
  USA300_FPR3757  VAIRSLILHKDEPMYLKKRTCVPTLLINGEHDPLIKDKNHFKLEAHFLNVTKKIFEHSGH
                  ************************************************************
  
  COL             APHIEEPEAFMNYYLKFLKSVS
  N315            APHIEEPEAFMNYYLNFLKSVS
  NCTC8325        APHIEEPEAFMNYYLKFLKSVS
  Newman          APHIEEPEAFMNYYLKFLKSVS
  USA300_FPR3757  APHIEEPEAFMNYYLKFLKSVS
                  ***************:******