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⊟Summary[edit | edit source]
- pan ID?: SAUPAN002549000
- symbol?: —
- synonym:
- description?: transcriptional regulator
- transcriptional regulator
- putative DUF28-containing protein
- YebC/PmpR family DNA-binding transcriptional regulator
- glucose-1-phosphate adenylyltransferase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3064651..3065367
- synteny block?: BlockID0017850
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0645
08BA02176:
C248_0753
11819-97:
MS7_0719
6850:
RSAU_000645
71193:
ST398NM01_0747
ECT-R 2:
ECTR2_620
ED133:
SAOV_0703
ED98:
SAAV_0631
HO 5096 0412:
SAEMRSA15_05950
JH1:
SaurJH1_0708
JH9:
SaurJH9_0693
JKD6008:
SAA6008_00685
JKD6159:
SAA6159_00623
LGA251:
SARLGA251_06020
M013:
M013TW_0656
MRSA252:
SAR0680
MSHR1132:
SAMSHR1132_06150
MSSA476:
SAS0634
Mu3:
SAHV_0666
Mu50:
SAV0669
MW2:
MW0631
RF122:
SAB0618
ST398:
SAPIG0747
T0131:
SAT0131_00739
TCH60:
HMPREF0772_12519 (yeeN)
TW20:
SATW20_07440
USA300_TCH1516:
USA300HOU_0690
VC40:
SAVC_02975
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MGRKWNNIKEKKAQKDKNTSRIYAKFGKEIYVAAKSGEPNPESNQALRLVLERAKTYSVP
N315 MGRKWNNIKEKKAQKDKNTSRIYAKFGKEIYVAAKSGEPNPESNQALRLVLERAKTYSVP
NCTC8325 MGRKWNNIKEKKAQKDKNTSRIYAKFGKEIYVAAKSGEPNPESNQALRLVLERAKTYSVP
Newman MGRKWNNIKEKKAQKDKNTSRIYAKFGKEIYVAAKSGEPNPESNQALRLVLERAKTYSVP
USA300_FPR3757 MGRKWNNIKEKKAQKDKNTSRIYAKFGKEIYVAAKSGEPNPESNQALRLVLERAKTYSVP
************************************************************
COL NHIIEKAIDKAKGAGDENFDHLRYEGFGPSGSMLIVDALTNNVNRTASDVRAAFGKNGGN
N315 NHIIEKAIDKAKGAGDENFDHLRYEGFGPSGSMLIVDALTNNVNRTASDVRAAFGKNGGN
NCTC8325 NHIIEKAIDKAKGAGDENFDHLRYEGFGPSGSMLIVDALTNNVNRTASDVRAAFGKNGGN
Newman NHIIEKAIDKAKGAGDENFDHLRYEGFGPSGSMLIVDALTNNVNRTASDVRAAFGKNGGN
USA300_FPR3757 NHIIEKAIDKAKGAGDENFDHLRYEGFGPSGSMLIVDALTNNVNRTASDVRAAFGKNGGN
************************************************************
COL MGVSGSVAYMFDHVATFGIEGKSVDEILETLMEQDVDVNDVIDDNGLTIVYAEPDQFAVV
N315 MGVSGSVAYMFDHVATFGIEGKSVDEILETLMEQDVDVNDVIDDNGLTIVYAEPDQFAVV
NCTC8325 MGVSGSVAYMFDHVATFGIEGKSVDEILETLMEQDVDVNDVIDDNGLTIVYAEPDQFAVV
Newman MGVSGSVAYMFDHVATFGIEGKSVDEILETLMEQDVDVNDVIDDNGLTIVYAEPDQFAVV
USA300_FPR3757 MGVSGSVAYMFDHVATFGIEGKSVDEILETLMEQDVDVNDVIDDNGLTIVYAEPDQFAVV
************************************************************
COL QDALRAAGVEEFKVAEFEMLPQTDIELSEADQVTFEKLIDALEDLEDVQNVFHNVDLK
N315 QDALRAAGVEEFKVAEFEMLPQTDIELSEADQVTFEKLIDALEDLEDVQNVFHNVDLK
NCTC8325 QDALRAAGVEEFKVAEFEMLPQTDIELSEADQVTFEKLIDALEDLEDVQNVFHNVDLK
Newman QDALRAAGVEEFKVAEFEMLPQTDIELSEADQVTFEKLIDALEDLEDVQNVFHNVDLK
USA300_FPR3757 QDALRAAGVEEFKVAEFEMLPQTDIELSEADQVTFEKLIDALEDLEDVQNVFHNVDLK
**********************************************************