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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003186000
- symbol?: cozEa
- synonym:
- description?: AI-2E family transporter
- AI-2E family transporter
- putative DUF20-containing protein
- domain of unknown function, putative
- membrane protein
- membrane spanning protein
- putative permease
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3576229..3577245
- synteny block?: BlockID0022730
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_0966
08BA02176:
C248_1036
11819-97:
MS7_0967
6850:
RSAU_000890
71193:
ST398NM01_1007
ECT-R 2:
ECTR2_866
ED133:
SAOV_0957c
ED98:
SAAV_0974
HO 5096 0412:
SAEMRSA15_08420
JH1:
SaurJH1_1029
JH9:
SaurJH9_1010
JKD6008:
SAA6008_00966
JKD6159:
SAA6159_00868
LGA251:
SARLGA251_09270
M013:
M013TW_0934
MRSA252:
SAR0979
MSHR1132:
SAMSHR1132_08590
MSSA476:
SAS0881
Mu3:
SAHV_1006
Mu50:
SAV1012
MW2:
MW0893
RF122:
SAB0878c
ST398:
SAPIG1007
T0131:
—
TCH60:
HMPREF0772_12224
TW20:
SATW20_10090
USA300_TCH1516:
USA300HOU_0970
VC40:
SAVC_04225
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MLNKVWFRTGIALIMLFILIKLFMEVHEVFTPIATIIGSVFLPFLISGFLFYICLPFQNL
N315 MLNKVWFRTGIALIMLFILIKLFMEVHEVFTPIATIIGSVFLPFLISGFLFYICLPFQNL
NCTC8325 MLNKVWFRTGIALIMLFILIKLFMEVHEVFTPIATIIGSVFLPFLISGFLFYICLPFQNL
Newman MLNKVWFRTGIALIMLFILIKLFMEVHEVFTPIATIIGSVFLPFLISGFLFYICLPFQNL
USA300_FPR3757 MLNKVWFRTGIALIMLFILIKLFMEVHEVFTPIATIIGSVFLPFLISGFLFYICLPFQNL
************************************************************
COL LEKVGFPRWASITTIMLALFAIIGLIVAFVAPIIISNINNLISQTPALQKEAEQIIKFAL
N315 LEKVGFPRWASITTIMLALFAIIGLIVAFVAPIIISNINNLISQTPALQKEAEQIIKFAL
NCTC8325 LEKVGFPRWASITTIMLALFAIIGLIVAFVAPIIISNINNLISQTPALQKEAEQIIKFAL
Newman LEKVGFPRWASITTIMLALFAIIGLIVAFVAPIIISNINNLISQTPALQKEAEQIIKFAL
USA300_FPR3757 LEKVGFPRWASITTIMLALFAIIGLIVAFVAPIIISNINNLISQTPALQKEAEQIIKFAL
************************************************************
COL AQMDKLPEDVTSRITNMVKSMGDGVTNILSNSLQYITSLISTIFLLIMVPFFLIYMLKDH
N315 AQMDKLPEDVTSRITNMVKSMGDGVTNILSNSLQYITSLISTIFLLIMVPFFLIYMLKDH
NCTC8325 AQMDKLPEDVTSRITNMVKSMGDGVTNILSNSLQYITSLISTIFLLIMVPFFLIYMLKDH
Newman AQMDKLPEDVTSRITNMVKSMGDGVTNILSNSLQYITSLISTIFLLIMVPFFLIYMLKDH
USA300_FPR3757 AQMDKLPEDVTSRITNMVKSMGDGVTNILSNSLQYITSLISTIFLLIMVPFFLIYMLKDH
************************************************************
COL EKFIPAVAKFFKGERKVFFVDLLTDLNFTLKSYIQGQVTVSVILGIFLYIGYSIIDLPYI
N315 EKFIPAVAKFFKGERKVFFVDLLTDLNFTLKSYIQGQVTVSVILGIFLYIGYSIIDLPYI
NCTC8325 EKFIPAVAKFFKGERKVFFVDLLTDLNFTLKSYIQGQVTVSVILGIFLYIGYSIIDLPYI
Newman EKFIPAVAKFFKGERKVFFVDLLTDLNFTLKSYIQGQVTVSVILGIFLYIGYSIIDLPYI
USA300_FPR3757 EKFIPAVAKFFKGERKVFFVDLLTDLNFTLKSYIQGQVTVSVILGIFLYIGYSIIDLPYI
************************************************************
COL PLLVLFAGVANLIPFLGSWLSFAPAAILGIIDSPTTFIWVCIITLIAHQLEGNIITPNVM
N315 PLLVLFAGVANLIPFLGSWLSFAPAAILGIIDSPTTFIWVCIITLIAHQLEGNIITPNVM
NCTC8325 PLLVLFAGVANLIPFLGSWLSFAPAAILGIIDSPTTFIWVCIITLIAHQLEGNIITPNVM
Newman PLLVLFAGVANLIPFLGSWLSFAPAAILGIIDSPTTFIWVCIITLIAHQLEGNIITPNVM
USA300_FPR3757 PLLVLFAGVANLIPFLGSWLSFAPAAILGIIDSPTTFIWVCIITLIAHQLEGNIITPNVM
************************************************************
COL GKSLSIHPLTIIVVILAAGDLGGFTLVLIAVPLYAVLKTVVSNIFKYRQRIIDKANSNVK
N315 GKSLSIHPLTIIVVILAAGDLGGFTLVLIAVPLYAVLKTVVSNIFKYRQRIIDKANSNVK
NCTC8325 GKSLSIHPLTIIVVILAAGDLGGFTLVLIAVPLYAVLKTVVSNIFKYRQRIIDKANSNVK
Newman GKSLSIHPLTIIVVILAAGDLGGFTLVLIAVPLYAVLKTVVSNIFKYRQRIIDKANSNVK
USA300_FPR3757 GKSLSIHPLTIIVVILAAGDLGGFTLVLIAVPLYAVLKTVVSNIFKYRQRIIDKANSNVK
************************************************************
COL D
N315 D
NCTC8325 D
Newman D
USA300_FPR3757 D
*