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Summary[edit | edit source]

  • pan ID?: SAUPAN003197000
  • symbol?:
  • synonym:
  • description?: hypothetical protein
  • strand?: +
  • coordinates?: 3589581..3589850
  • synteny block?: BlockID0022840
  • occurrence?: in 94% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_0973
    08BA02176:
    11819-97:
    MS7_0975
    6850:
    RSAU_000904
    71193:
    ST398NM01_1015
    ECT-R 2:
    ECTR2_874
    ED133:
    ED98:
    SAAV_0981
    HO 5096 0412:
    SAEMRSA15_08490
    JH1:
    SaurJH1_1036
    JH9:
    SaurJH9_1017
    JKD6008:
    SAA6008_00974
    JKD6159:
    SAA6159_00875
    LGA251:
    SARLGA251_09340
    M013:
    M013TW_0944
    MRSA252:
    SAR0989
    MSHR1132:
    SAMSHR1132_08660
    MSSA476:
    SAS0888
    Mu3:
    SAHV_1013
    Mu50:
    SAV1019
    MW2:
    MW0900
    RF122:
    SAB0885
    ST398:
    SAPIG1015
    T0131:
    SAT0131_01054 (deoD)
    TCH60:
    HMPREF0772_12215
    TW20:
    SATW20_10160
    USA300_TCH1516:
    USA300HOU_0977
    VC40:
    SAVC_04260

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             ----MINKRFIDEGKTIDVYLFEALNNQIIIAIPDWFWSYQMAMTLDEETCFEAILMQLF
    N315            ----MINKRFIDEGKTIDVYLFEALNNQIIIAIPDWFWSYQMAMTLDEETCFEAILMQLF
    NCTC8325        -MALLINKRFIDEGKTIDVYLFEALNNQIIIAIPDWFWSYQMAMTLDEETCFEAILMQLF
    Newman          MVALLINKRFIDEGKTIDVYLFEALNNQIIIAIPDWFWSYQMAMTLDEETCFEAILMQLF
    USA300_FPR3757  ----MINKRFIDEGKTIDVYLFEALNNQIIIAIPDWFWSYQMAMTLDEETCFEAILMQLF
                        :*******************************************************

    COL             VFKEEEEAESIASQLTDWIETYKKEKD
    N315            VFKEEEEAESIASQLTDWIETYKKEKD
    NCTC8325        VFKEEEEAESIASQLTDWIETYKKEKD
    Newman          VFKEEEEAESIASQLTDWIETYKKEKD
    USA300_FPR3757  VFKEEEEAESIASQLTDWIETYKKEKD
                    ***************************