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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003514000
- symbol?: fabD
- synonym:
- description?: malonyl CoA-ACP transacylase
- malonyl CoA-ACP transacylase
- malonyl CoA-acyl carrier protein transacylase
- ACP S-malonyltransferase
- putative malonyl CoA-acyl carrier proteintransacylase
- malonyl-CoA-[acyl-carrier-protein] transacylase
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3854476..3855343
- synteny block?: BlockID0025930
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1188 (fabD)
08BA02176:
C248_1260 (fabD)
11819-97:
MS7_1188 (fabD)
6850:
RSAU_001112 (fabD)
71193:
ST398NM01_1229
ECT-R 2:
ECTR2_1086 (fabD)
ED133:
SAOV_1233
ED98:
SAAV_1202 (fabD)
HO 5096 0412:
SAEMRSA15_10630 (fabD)
JH1:
SaurJH1_1314
JH9:
SaurJH9_1289
JKD6008:
SAA6008_01185 (fabD)
JKD6159:
SAA6159_01083 (fabD)
LGA251:
SARLGA251_11410 (fabD)
M013:
M013TW_1168
MRSA252:
SAR1206 (fabD)
MSHR1132:
SAMSHR1132_10710
MSSA476:
SAS1164
Mu3:
SAHV_1220 (fabD)
Mu50:
SAV1230 (fabD)
MW2:
MW1113 (fabD)
RF122:
SAB1094 (fabD)
ST398:
SAPIG1229 (fabD)
T0131:
SAT0131_01280 (ureE)
TCH60:
HMPREF0772_12002 (fabD)
TW20:
SATW20_12240 (fabD)
USA300_TCH1516:
USA300HOU_1166 (fabD)
VC40:
SAVC_05315
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSKTAIIFPGQGAQKVGMAQDLFNNNDQATEILTSAANTLDFDILETMFTDEEGKLGETE
N315 MSKTAIIFPGQGAQKVGMAQDLFNNNDQATEILTSAAKTLDFDILETMFTDEEGKLGETE
NCTC8325 MSKTAIIFPGQGAQKVGMAQDLFNNNDQATEILTSAANTLDFDILETMFTDEEGKLGETE
Newman MSKTAIIFPGQGAQKVGMAQDLFNNNDQATEILTSAANTLDFDILETMFTDEEGKLGETE
USA300_FPR3757 MSKTAIIFPGQGAQKVGMAQDLFNNNDQATEILTSAANTLDFDILETMFTDEEGKLGETE
*************************************:**********************
COL NTQPALLTHSSALLAALKNLNPDFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQ
N315 NTQPALLTHSSALLAALKNLNPDFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQ
NCTC8325 NTQPALLTHSSALLAALKNLNPDFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQ
Newman NTQPALLTHSSALLAALKNLNPDFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQ
USA300_FPR3757 NTQPALLTHSSALLAALKNLNPDFTMGHSLGEYSSLVAADVLSFEDAVKIVRKRGQLMAQ
************************************************************
COL AFPTGVGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANINCPGQIVVSGHKALIDELVEK
N315 AFPTGVGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANINCPGQIVVSGHKALIDELVEK
NCTC8325 AFPTGVGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANINCPGQIVVSGHKALIDELVEK
Newman AFPTGVGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANINCPGQIVVSGHKALIDELVEK
USA300_FPR3757 AFPTGVGSMAAVLGLDFDKVDEICKSLSSDDKIIEPANINCPGQIVVSGHKALIDELVEK
************************************************************
COL GKSLGAKRVMPLAVSGPFHSSLMKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGETDKEV
N315 GKSLGAKRVMPLAVSGPFHSSLMKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGETDKEV
NCTC8325 GKSLGAKRVMPLAVSGPFHSSLMKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGETDKEV
Newman GKSLGAKRVMPLAVSGPFHSSLMKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGETDKEV
USA300_FPR3757 GKSLGAKRVMPLAVSGPFHSSLMKVIEEDFSSYINQFEWRDAKFPVVQNVNAQGETDKEV
************************************************************
COL IKSNMVKQLYSPVQFINSTEWLIDQGVDHFIEIGPGKVLSGLIKKINRDVKLTSIQTLED
N315 IKSNMVKQLYSPVQFINSTEWLIDQGVDHFIEIGPGKVLSGLIKKINRDVKLTSIQTLED
NCTC8325 IKSNMVKQLYSPVQFINSTEWLIDQGVDHFIEIGPGKVLSGLIKKINRDVKLTSIQTLED
Newman IKSNMVKQLYSPVQFINSTEWLIDQGVDHFIEIGPGKVLSGLIKKINRDVKLTSIQTLED
USA300_FPR3757 IKSNMVKQLYSPVQFINSTEWLIDQGVDHFIEIGPGKVLSGLIKKINRDVKLTSIQTLED
************************************************************
COL VKGWNEND
N315 VKGWNEND
NCTC8325 VKGWNEND
Newman VKGWNEND
USA300_FPR3757 VKGWNEND
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