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⊟Summary[edit | edit source]
- pan ID?: SAUPAN003523000
- symbol?: —
- synonym:
- description?: DNA-binding protein
- DNA-binding protein
- putative DNA-binding protein
- Sigma70 region 4-domain containing protein
- helix-turn-helix protein, YlxM / p13 like family protein
- protein //
- Sec family secretory protein signal
- Signal recognition particle associated protein
- signal recognition particle protein
- transcriptional regulator
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 3863368..3863700
- synteny block?: BlockID0026020
- occurrence?: in 97% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1194
08BA02176:
C248_1267
11819-97:
MS7_1194
6850:
RSAU_001118
71193:
ST398NM01_1236
ECT-R 2:
ECTR2_1092
ED133:
SAOV_1239
ED98:
SAAV_1209
HO 5096 0412:
SAEMRSA15_10690
JH1:
SaurJH1_1320
JH9:
SaurJH9_1295
JKD6008:
SAA6008_01191
JKD6159:
SAA6159_01089
LGA251:
SARLGA251_11470
M013:
M013TW_1174
MRSA252:
SAR1212
MSHR1132:
SAMSHR1132_10770
MSSA476:
SAS1170
Mu3:
SAHV_1226
Mu50:
SAV1236
MW2:
MW1119
RF122:
SAB1100
ST398:
SAPIG1236
T0131:
SAT0131_01286 (sarY)
TCH60:
HMPREF0772_11995
TW20:
SATW20_12300
USA300_TCH1516:
—
VC40:
SAVC_05345
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIR
N315 MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIR
NCTC8325 MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIR
Newman MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIR
USA300_FPR3757 MGQNDLVKTLRMNYLFDFYQSLLTNKQRNYLELFYLEDYSLSEIADTFNVSRQAVYDNIR
************************************************************
COL RTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRYIQQLEDLE
N315 RTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRYIQQLEDLE
NCTC8325 RTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRYIQQLEDLE
Newman RTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRYIQQLEDLE
USA300_FPR3757 RTGDLVEDYEKKLELYQKFEQRREIYDEMKQHLSNPEQIQRYIQQLEDLE
**************************************************