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Summary[edit | edit source]

  • pan ID?: SAUPAN004238000
  • symbol?: dtd
  • synonym:
  • description?: D-tyrosyl-tRNA(Tyr) deacylase

      descriptions from strain specific annotations:

    • D-tyrosyl-tRNA(Tyr) deacylase
    • pseudogene
  • strand?: -
  • coordinates?: 4483804..4484256
  • synteny block?: BlockID0032660
  • occurrence?: in 100% of 33 strains

Orthologs[edit | edit source]

    COL:
    N315:
    NCTC8325:
    Newman:
    USA300_FPR3757:
    04-02981:
    SA2981_1591
    08BA02176:
    C248_1676 (dtd)
    11819-97:
    MS7_1648 (dtd)
    6850:
    RSAU_001494 (dtd)
    71193:
    ST398NM01_1696
    ECT-R 2:
    ECTR2_1481 (dtd)
    ED133:
    SAOV_1630 (dtd)
    ED98:
    SAAV_1626
    HO 5096 0412:
    SAEMRSA15_15500
    JH1:
    SaurJH1_1723
    JH9:
    SaurJH9_1690
    JKD6008:
    SAA6008_01602 (dtd)
    JKD6159:
    SAA6159_01565 (dtd)
    LGA251:
    SARLGA251_15350
    M013:
    M013TW_1653
    MRSA252:
    SAR1713
    MSHR1132:
    SAMSHR1132_14690
    MSSA476:
    SAS1569
    Mu3:
    SAHV_1620
    Mu50:
    SAV1633
    MW2:
    MW1583
    RF122:
    SAB1502c (dtd)
    ST398:
    SAPIG1696 (dtd)
    T0131:
    SAT0131_01732
    TCH60:
    HMPREF0772_11509 (dtd)
    TW20:
    SATW20_16270
    USA300_TCH1516:
    USA300HOU_1631 (dtd)
    VC40:
    SAVC_07410

Genome Viewer[edit | edit source]

COL
N315
NCTC8325
Newman
USA300_FPR3757

Alignments[edit | edit source]

  • alignment of orthologues:
    CLUSTAL format alignment by MAFFT L-INS-i (v7.307)


    COL             MKVVVQRVKEASVTNDTLNNQIKKGYCLLVGIGQNSTEQDADVIAKKIANARLFEDDNNK
    N315            MKVVVQRVKEASVTNDTLNNQIKKGYCLLVGIGQNSTEQDADVIAKKIANARLFEDDNNK
    NCTC8325        MKVVVQRVKEASVTNDTLNNQIKKGYCLLVGIGQNSTEQDADVIAKKIANARLFEDDNNK
    Newman          MKVVVQRVKEASVTNDTLNNQIKKGYCLLVGIGQNSTEQDADVIAKKIANARLFEDDNNK
    USA300_FPR3757  MKVVVQRVKEASVTNDTLNNQIKKGYCLLVGIGQNSTEQDADVIAKKIANARLFEDDNNK
                    ************************************************************

    COL             LNFNIQQMNGEILSVSQFTLYADVKKGNRPGFSNSKNPDQAVKIYEYFNDALRAYGLTVK
    N315            LNFNIQQMNGEILSVSQFTLYADVKKGNRPGFSNSKNPDQAVKIYEYFNDALRAYGLTVK
    NCTC8325        LNFNIQQMNGEILSVSQFTLYADVKKGNRPGFSNSKNPDQAVKIYEYFNDALRAYGLTVK
    Newman          LNFNIQQMNGEILSVSQFTLYADVKKGNRPGFSNSKNPDQAVKIYEYFNDALRAYGLTVK
    USA300_FPR3757  LNFNIQQMNGEILSVSQFTLYADVKKGNRPGFSNSKNPDQAVKIYEYFNDALRAYGLTVK
                    ************************************************************

    COL             TGEFGTHMNVSINNDGPVTIIYESQDGKIQ
    N315            TGEFGTHMNVSINNDGPVTIIYESQDGKIQ
    NCTC8325        TGEFGTHMNVSINNDGPVTIIYESQDGKIQ
    Newman          TGEFGTHMNVSINNDGPVTIIYESQDGKIQ
    USA300_FPR3757  TGEFGTHMNVSINNDGPVTIIYESQDGKIQ
                    ******************************