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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004301000
- symbol?: lysP
- synonym:
- description?: gamma-aminobutyrate permease
- gamma-aminobutyrate permease
- lysine-specific permease
- amino acid permease
- amino acid permease family protein
- APC family amino acid-polyamine-organocation transporter
- APC family lysine-specific permease
- lysine-specific permease LysP
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4540804..4542297
- synteny block?: BlockID0033250
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1641 (lysP)
08BA02176:
C248_1723 (lysP)
11819-97:
MS7_1689
6850:
RSAU_001540 (lysP)
71193:
ST398NM01_1736
ECT-R 2:
ECTR2_1522
ED133:
SAOV_1670 (lysP)
ED98:
SAAV_1670
HO 5096 0412:
SAEMRSA15_15920 (lysP)
JH1:
SaurJH1_1773
JH9:
SaurJH9_1739
JKD6008:
SAA6008_01649 (lysP)
JKD6159:
SAA6159_01606 (lysP)
LGA251:
SARLGA251_15740 (lysP)
M013:
M013TW_1695
MRSA252:
SAR1761 (lysP)
MSHR1132:
SAMSHR1132_15090
MSSA476:
SAS1610
Mu3:
SAHV_1668
Mu50:
SAV1681
MW2:
MW1625 (lysP)
RF122:
SAB1541c (lysP)
ST398:
SAPIG1736
T0131:
SAT0131_01784 (argS)
TCH60:
HMPREF0772_11469 (lysP)
TW20:
SATW20_16720 (lysP)
USA300_TCH1516:
USA300HOU_1668 (lysP)
VC40:
SAVC_07615 (lysP)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MSKVQNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIM
N315 MSKVQNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIM
NCTC8325 MSKVQNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIM
Newman MSKVQNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIM
USA300_FPR3757 MSKVQNESNNVVKRGLKDRHISMIAIGGCIGTGLFVTSGGAIHDAGALGALIGYAIIGIM
************************************************************
COL VFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGWNYWFNWVVTVAADITIAAQVI
N315 VFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGWNYWFNWVVTVAADITIAAQVI
NCTC8325 VFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGWNYWFNWVVTVAADITIAAQVI
Newman VFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGWNYWFNWVVTVAADITIAAQVI
USA300_FPR3757 VFFLMTSLGEMATYLPVSGSFSTYATRFVDPSLGFALGWNYWFNWVVTVAADITIAAQVI
************************************************************
COL QYWTPLQGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVVTVIVFIAIGLLTIV
N315 QYWTPLQGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVITVIVFIAIGLLTIV
NCTC8325 QYWTPLQGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVVTVIVFIAIGLLTIV
Newman QYWTPLQGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVVTVIVFIAIGLLTIV
USA300_FPR3757 QYWTPLQGIPAWAWSALFLVIIFSLNSLSVRVYGESEYWLALIKVVTVIVFIAIGLLTIV
*********************************************:**************
COL GIMGGHVVGFEIFNKGEGPILGGNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPE
N315 GIMGGHVVGFEIFNKGEGPILGGNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPE
NCTC8325 GIMGGHVVGFEIFNKGEGPILGGNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPE
Newman GIMGGHVVGFEIFNKGEGPILGGNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPE
USA300_FPR3757 GIMGGHVVGFEIFNKGEGPILGGNLGGSLLSILGVFLIAGFSFQGTELIGITAGESENPE
************************************************************
COL RAVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSALMGGSDNVATSPFTLVFKNAGFAFA
N315 RAVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSALMGGSDNVATSPFTLVFKNAGFAFA
NCTC8325 RAVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSALMGGSDNVATSPFTLVFKNAGFAFA
Newman RAVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSALMGGSDNVATSPFTLVFKNAGFAFA
USA300_FPR3757 RAVPKAIKQVFWRILLFYILAIFVIGMLIPYDSSALMGGSDNVATSPFTLVFKNAGFAFA
************************************************************
COL ASFMNAVILTSVLSAGNSGMYASTRMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIV
N315 ASFMNAVILTSVLSAGNSGMYASTRMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIV
NCTC8325 ASFMNAVILTSVLSAGNSGMYASTRMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIV
Newman ASFMNAVILTSVLSAGNSGMYASTRMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIV
USA300_FPR3757 ASFMNAVILTSVLSAGNSGMYASTRMLYSMSKDKLAFEAFGKTNKNGVPYMSLLVTAIIV
************************************************************
COL VIIFVLQSLTKGAYEYIVAASGLTGFIAWVGIAVSHYRFRRAFDKQNYDKSKLKYTAKLF
N315 VIIFVLQSLTKGAYEYIVAASGLTGFIAWVGIAVSHYRFRRAFDKQNYDKSKLKYTAKLF
NCTC8325 VIIFVLQSLTKGAYEYIVAASGLTGFIAWVGIAVSHYRFRRAFDKQNYDKSKLKYTAKLF
Newman VIIFVLQSLTKGAYEYIVAASGLTGFIAWVGIAVSHYRFRRAFDKQNYDKSKLKYTAKLF
USA300_FPR3757 VIIFVLQSLTKGAYEYIVAASGLTGFIAWVGIAVSHYRFRRAFDKQNYDKSKLKYTAKLF
************************************************************
COL PFGPLFAGFLCIVVIIGQDVDFIKTGDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKKIP
N315 PFGPLFAGFLCIVVIIGQDVDFIKTGDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKKIP
NCTC8325 PFGPLFAGFLCIVVIIGQDVDFIKTGDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKKIP
Newman PFGPLFAGFLCIVVIIGQDVDFIKTGDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKKIP
USA300_FPR3757 PFGPLFAGFLCIVVIIGQDVDFIKTGDFNFSRFLITYMGIPVFLAFFIYHKLRYKTKKIP
************************************************************
COL LEQVDLRQDVSMDEIKG
N315 LEQVDLRQDVSMDEIKG
NCTC8325 LEQVDLRQDVSMDEIKG
Newman LEQVDLRQDVSMDEIKG
USA300_FPR3757 LEQVDLRQDVSMDEIKG
*****************