Jump to navigation
Jump to search
⊟Summary[edit | edit source]
- pan ID?: SAUPAN004849000
- symbol?: —
- synonym:
- description?: DUF402 domain-containing protein
- DUF402 domain-containing protein
- hypothetical protein with DUF402
- cysteinyl-tRNA synthetase-like protein
- Cysteinyl-tRNA synthetase related protein
- protein LMOf2365_1711
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5056068..5056610
- synteny block?: BlockID0037790
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1823
08BA02176:
C248_1938
11819-97:
MS7_1902
6850:
RSAU_001754
71193:
ST398NM01_1960
ECT-R 2:
ECTR2_1738
ED133:
SAOV_1894
ED98:
SAAV_1917
HO 5096 0412:
SAEMRSA15_17740
JH1:
SaurJH1_1955
JH9:
SaurJH9_1921
JKD6008:
SAA6008_01824
JKD6159:
SAA6159_01798
LGA251:
SARLGA251_17490
M013:
M013TW_1903
MRSA252:
SAR1957
MSHR1132:
SAMSHR1132_17120
MSSA476:
SAS1789
Mu3:
SAHV_1852
Mu50:
SAV1867
MW2:
MW1807
RF122:
SAB1800c
ST398:
SAPIG1960
T0131:
SAT0131_01989
TCH60:
HMPREF0772_11277
TW20:
SATW20_18610
USA300_TCH1516:
USA300HOU_1862
VC40:
SAVC_08590
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MVRESIPKEGENIKIQSYKHDGKIHRVWSETTILKGTDHVVIGGNDHTLVTESDGRTWIT
N315 MVRESIPKEGENIKIQSYKHDGKIHRVWSETTILKGTDHVVIGGNDHTLVTESDGRTWIT
NCTC8325 MVRESIPKEGENIKIQSYKHDGKIHRVWSETTILKGTDHVVIGGNDHTLVTESDGRTWIT
Newman MVRESIPKEGENIKIQSYKHDGKIHRVWSETTILKGTDHVVIGGNDHTLVTESDGRTWIT
USA300_FPR3757 MVRESIPKEGENIKIQSYKHDGKIHRVWSETTILKGTDHVVIGGNDHTLVTESDGRTWIT
************************************************************
COL REPAIVYFHSEYWFNVICMFREDGIYYYCNLSSPFVCDEEALKYIDYDLDIKVYPNGKYH
N315 REPAIVYFHSEYWFNVICMFREDGIYYYCNLSSPFVCDEEALKYIDYDLDIKVYPNGKYH
NCTC8325 REPAIVYFHSEYWFNVICMFREDGIYYYCNLSSPFVCDEEALKYIDYDLDIKVYPNGKYH
Newman REPAIVYFHSEYWFNVICMFREDGIYYYCNLSSPFVCDEEALKYIDYDLDIKVYPNGKYH
USA300_FPR3757 REPAIVYFHSEYWFNVICMFREDGIYYYCNLSSPFVCDEEALKYIDYDLDIKVYPNGKYH
************************************************************
COL LLDEDEYEQHMNQMNYPHDIDIILRRNVDILQQWIEQKKGPFAPDFIKVWKERYKKIRQY
N315 LLDEDEYEQHMNQMNYPHDIDIILRRNVDILQQWIEQKKGPFAPDFIKVWKERYKKIRQY
NCTC8325 LLDEDEYEQHMNQMNYPHDIDIILRRNVDILQQWIEQKKGPFAPDFIKVWKERYKKIRQY
Newman LLDEDEYEQHMNQMNYPHDIDIILRRNVDILQQWIEQKKGPFAPDFIKVWKERYKKIRQY
USA300_FPR3757 LLDEDEYEQHMNQMNYPHDIDIILRRNVDILQQWIEQKKGPFAPDFIKVWKERYKKIRQY
************************************************************