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⊟Summary[edit | edit source]
- pan ID?: SAUPAN004899000
- symbol?: vraR
- synonym:
- description?: DNA-binding response regulator
- DNA-binding response regulator
- DNA-binding response regulator VraR
- response regulator transcription factor
- two-component response regulator
- two-component response regulator VraR, putative
- Response regulator protein vraR
- LuxR family two component transcriptional regulator
- putative response regulator
- response regulator receiver
- two component LuxR family transcriptional regulator
- Two component transcriptional regulator VraR, LuxR family
- YvqC
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5095240..5095869
- synteny block?: BlockID0038050
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_1840 (vraR)
08BA02176:
C248_1956 (vraR)
11819-97:
MS7_1919 (vraR)
6850:
RSAU_001771 (vraR)
71193:
ST398NM01_1977
ECT-R 2:
ECTR2_1755
ED133:
SAOV_1982
ED98:
SAAV_1949 (vraR)
HO 5096 0412:
SAEMRSA15_17910
JH1:
SaurJH1_1972
JH9:
SaurJH9_1938
JKD6008:
SAA6008_01904 (vraR)
JKD6159:
SAA6159_01815 (vraR)
LGA251:
SARLGA251_17660 (vraR)
M013:
M013TW_1920
MRSA252:
SAR1974
MSHR1132:
SAMSHR1132_17290
MSSA476:
SAS1806
Mu3:
SAHV_1869 (vraR)
Mu50:
SAV1884 (vraR)
MW2:
MW1824 (vraR)
RF122:
SAB1816c
ST398:
SAPIG1977
T0131:
SAT0131_02008
TCH60:
HMPREF0772_11260 (vraR)
TW20:
SATW20_18780 (vraR)
USA300_TCH1516:
USA300HOU_1880 (vraR)
VC40:
SAVC_08675 (vraR)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMDD
N315 MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMED
NCTC8325 MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMDD
Newman MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMDD
USA300_FPR3757 MTIKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLLMDD
**********************************************************:*
COL MDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTS
N315 MDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTS
NCTC8325 MDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTS
Newman MDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTS
USA300_FPR3757 MDGVEATTQIKKDLPQIKVLMLTSFIEDKEVYRALDAGVDSYILKTTSAKDIADAVRKTS
************************************************************
COL RGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVK
N315 RGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVK
NCTC8325 RGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVK
Newman RGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVK
USA300_FPR3757 RGESVFEPEVLVKMRNRMKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVK
************************************************************
COL THVSNILSKLEVQDRTQAVIYAFQHNLIQ
N315 THVSNILSKLEVQDRTQAVIYAFQHNLIQ
NCTC8325 THVSNILSKLEVQDRTQAVIYAFQHNLIQ
Newman THVSNILSKLEVQDRTQAVIYAFQHNLIQ
USA300_FPR3757 THVSNILSKLEVQDRTQAVIYAFQHNLIQ
*****************************