PangenomeCOLN315NCTC8325NewmanUSA300_FPR375704-0298108BA0217611819-97685071193ECT-R 2ED133ED98HO 5096 0412JH1JH9JKD6008JKD6159LGA251M013MRSA252MSHR1132MSSA476MW2Mu3Mu50RF122ST398T0131TCH60TW20USA300_TCH1516VC40

⊟Summary

• pan ID^?: SAUPAN005412000
• symbol^?: rpmE2
• synonym:
• description^?: 50S ribosomal protein L31 type B

  descriptions from strain specific annotations:

  • 50S ribosomal protein L31 type B
  • 50S ribosomal protein L31
  • type B 50S ribosomal protein L31
  • 50S ribosomalprotein L31p
  • putative 50S ribosomal protein L31
• strand^?: -
• coordinates^?: 5570920..5571174
• synteny block^?: BlockID0042080
• occurrence^?: in 100% of 33 strains

⊟Orthologs

COL:
SACOL2112 (rpmE2)
N315:
SA1922 (rpmE2)
NCTC8325:
SAOUHSC_02361 (rpmE2)
Newman:
NWMN_2024 (rpmE2)
USA300_FPR3757:
SAUSA300_2074 (rpmE2)
04-02981:
SA2981_2060 (rpmE)
08BA02176:
C248_2134 (rpmE)
11819-97:
MS7_2136 (rpmE)
6850:
RSAU_001958 (rpmE)
71193:
ST398NM01_2162
ECT-R 2:
ECTR2_1976 (rpmE)
ED133:
SAOV_2161c
ED98:
SAAV_2175 (rpmE2)
HO 5096 0412:
SAEMRSA15_20280 (rpmE)
JH1:
SaurJH1_2194 (rpmE2)
JH9:
SaurJH9_2156 (rpmE2)
JKD6008:
SAA6008_02158 (rpmE2)
JKD6159:
SAA6159_02034 (rpmE2)
LGA251:
SARLGA251_19210 (rpmE)
M013:
M013TW_2079
MRSA252:
SAR2208 (rpmE2)
MSHR1132:
SAMSHR1132_19430
MSSA476:
SAS2023 (rpmE2)
Mu3:
SAHV_2104 (rpmE2)
Mu50:
SAV2120 (rpmE2)
MW2:
MW2044 (rpmE2)
RF122:
SAB2004c (rpmE2)
ST398:
SAPIG2162 (rpmE)
T0131:
SAT0131_02283
TCH60:
HMPREF0772_11070 (rpmE)
TW20:
SATW20_22580 (rpmE)
USA300_TCH1516:
USA300HOU_2108 (rpmE2)
VC40:
SAVC_09475 (rpmE2)

⊟Genome Viewer

COL
N315
NCTC8325
Newman
USA300_FPR3757

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
  
  
  COL             MKQGIHPEYHQVIFLDTTTNFKFLSGSTKTSSEMMEWEDGKEYPVIRLDISSDSHPFYTG
  N315            MKQGIHPEYHQVIFLDTTTNFKFLSGSTKTSSEMMEWEDGKEYPVIRLDISSDSHPFYTG
  NCTC8325        MKQGIHPEYHQVIFLDTTTNFKFLSGSTKTSSEMMEWEDGKEYPVIRLDISSDSHPFYTG
  Newman          MKQGIHPEYHQVIFLDTTTNFKFLSGSTKTSSEMMEWEDGKEYPVIRLDISSDSHPFYTG
  USA300_FPR3757  MKQGIHPEYHQVIFLDTTTNFKFLSGSTKTSSEMMEWEDGKEYPVIRLDISSDSHPFYTG
                  ************************************************************
  
  COL             RQKFAAADGRVERFNKKFGLKSNN
  N315            RQKFAAADGRVERFNKKFGLKSNN
  NCTC8325        RQKFAAADGRVERFNKKFGLKSNN
  Newman          RQKFAAADGRVERFNKKFGLKSNN
  USA300_FPR3757  RQKFAAADGRVERFNKKFGLKSNN
                  ************************