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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005697000
- symbol?: rplV
- synonym:
- description?: 50S ribosomal protein L22
- strand?: -
- coordinates?: 5807851..5808204
- synteny block?: BlockID0044430
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2183 (rplV)
08BA02176:
C248_2281 (rplV)
11819-97:
MS7_2265 (rplV)
6850:
RSAU_002081 (rplV)
71193:
ST398NM01_2298
ECT-R 2:
ECTR2_2107 (rplV)
ED133:
SAOV_2282c
ED98:
SAAV_2307 (rplV)
HO 5096 0412:
SAEMRSA15_21440 (rplV)
JH1:
SaurJH1_2313 (rplV)
JH9:
SaurJH9_2272 (rplV)
JKD6008:
SAA6008_02282 (rplV)
JKD6159:
SAA6159_02152 (rplV)
LGA251:
SARLGA251_20310 (rplV)
M013:
M013TW_2204
MRSA252:
SAR2330 (rplV)
MSHR1132:
SAMSHR1132_20710
MSSA476:
SAS2136 (rplV)
Mu3:
SAHV_2229 (rplV)
Mu50:
SAV2245 (rplV)
MW2:
MW2164 (rplV)
RF122:
SAB2117c (rplV)
ST398:
SAPIG2298 (rplV)
T0131:
SAT0131_02418
TCH60:
HMPREF0772_10953 (rplV)
TW20:
SATW20_23790 (rplV)
USA300_TCH1516:
USA300HOU_p3
VC40:
SAVC_10095 (rplV)
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MEAKAVARTIRIAPRKVRLVLDLIRGKNAAEAIAILKLTNKASSPVIEKVLMSALANAEH
N315 MEAKAVARTIRIAPRKVRLVLDLIRGKNAAEAIAILKLTNKASSPVIEKVLMSALANAEH
NCTC8325 MEAKAVARTIRIAPRKVRLVLDLIRGKNAAEAIAILKLTNKASSPVIEKVLMSALANAEH
Newman MEAKAVARTIRIAPRKVRLVLDLIRGKNAAEAIAILKLTNKASSPVIEKVLMSALANAEH
USA300_FPR3757 MEAKAVARTIRIAPRKVRLVLDLIRGKNAAEAIAILKLTNKASSPVIEKVLMSALANAEH
************************************************************
COL NYDMNTDELVVKEAYANEGPTLKRFRPRAQGRASAINKRTSHITIVVSDGKEEAKEA
N315 NYDMNTDELVVKEAYANEGPTLKRFRPRAQGRASAINKRTSHITIVVSDGKEEAKEA
NCTC8325 NYDMNTDELVVKEAYANEGPTLKRFRPRAQGRASAINKRTSHITIVVSDGKEEAKEA
Newman NYDMNTDELVVKEAYANEGPTLKRFRPRAQGRASAINKRTSHITIVVSDGKEEAKEA
USA300_FPR3757 NYDMNTDELVVKEAYANEGPTLKRFRPRAQGRASAINKRTSHITIVVSDGKEEAKEA
*********************************************************