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⊟Summary[edit | edit source]
- pan ID?: SAUPAN005769000
- symbol?: nhaC
- synonym:
- description?: Na+/H+ antiporter NhaC
- Na+/H+ antiporter NhaC
- NA+/H+ antiporter NhaC, putative
- Na_ antiporter
- NhaC family Na(+)/H(+) antiporter
- putative Na+/H+ antiporter
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 5859600..5860793
- synteny block?: BlockID0045150
- occurrence?: in 100% of 33 strains
⊟Orthologs[edit | edit source]
04-02981:
SA2981_2239 (nhaC)
08BA02176:
C248_2340
11819-97:
MS7_2318 (nhaC)
6850:
RSAU_002133 (nhaC)
71193:
ST398NM01_2351
ECT-R 2:
ECTR2_2160 (nhaC)
ED133:
SAOV_2340c
ED98:
SAAV_2362 (nhaC)
HO 5096 0412:
SAEMRSA15_21980
JH1:
SaurJH1_2367
JH9:
SaurJH9_2324
JKD6008:
SAA6008_02336 (nhaC)
JKD6159:
SAA6159_02204
LGA251:
SARLGA251_20830
M013:
M013TW_2257
MRSA252:
SAR2385
MSHR1132:
SAMSHR1132_21250
MSSA476:
SAS2191
Mu3:
SAHV_2285
Mu50:
SAV2301
MW2:
MW2219
RF122:
SAB2173c
ST398:
SAPIG2351 (nhaC)
T0131:
SAT0131_02479
TCH60:
HMPREF0772_10897 (nhaC)
TW20:
SATW20_24310
USA300_TCH1516:
USA300HOU_2282 (nhaC)
VC40:
SAVC_10360
⊟Genome Viewer[edit | edit source]
| COL | |
| N315 | |
| NCTC8325 | |
| Newman | |
| USA300_FPR3757 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.307)
COL MMKRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYATWIAKRVGLTWQDLEK
N315 MMKRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYATWIAKRVGLTWQDLEK
NCTC8325 MMKRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYATWIAKRVGLTWQDLEK
Newman MMKRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYATWIAKRVGLTWQDLEK
USA300_FPR3757 MMKRKPTFLESISTMIVMVIVVVTGFVFFDIPIQVLLIIASAYATWIAKRVGLTWQDLEK
************************************************************
COL GIAERLNTAMPAILIILAVGIIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTS
N315 GIAERLNTAMPAILIILAVGIIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTS
NCTC8325 GIAERLNTAMPAILIILAVGIIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTS
Newman GIAERLNTAMPAILIILAVGIIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTS
USA300_FPR3757 GIAERLNTAMPAILIILAVGIIVGSWMFSGTVPALIYYGLDLLNPSYFLISAFFISAVTS
************************************************************
COL VATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAVFGDKMSPLSDTTNLAALVTK
N315 VATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAVFGDKMSPLSDTTNLAALVTK
NCTC8325 VATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAVFGDKMSPLSDTTNLAALVTK
Newman VATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAVFGDKMSPLSDTTNLAALVTK
USA300_FPR3757 VATGTAWGSASTAGIALISIGNQLGIPPGMAAGAIIAGAVFGDKMSPLSDTTNLAALVTK
************************************************************
COL VNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQIYQINIWVWV
N315 VNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQIYQINIWVWV
NCTC8325 VNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQIYQINIWVWV
Newman VNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQIYQINIWVWV
USA300_FPR3757 VNIFKHIHSMMWTTIPASIIGLLVWFIAGFQFKGHSNDKQIQTLLSELAQIYQINIWVWV
************************************************************
COL PLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNESMIHQSHIS
N315 PLIVIIVCLLFKMATVPAMVISSFSAIIVGTFNHHFKMTDGFKATFSGFNDSMIHQSHIS
NCTC8325 PLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNESMIHQSHIS
Newman PLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNESMIHQSHIS
USA300_FPR3757 PLIVIIVCLLFKMATVPAMLISSFSAIIVGTFNHHFKMTDGFKATFSGFNESMIHQSHIS
*******************:******************************:*********
COL SSVKSLLEQGGMMSMTQILVTIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITV
N315 SSVKSLLEQGGMMSMTQILVTIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITV
NCTC8325 SSVKSLLEQGGMMSMTQILVTIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITV
Newman SSVKSLLEQGGMMSMTQILVTIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITV
USA300_FPR3757 SSVKSLLEQGGMMSMTQILVTIFCGYAFAGIVEKAGCLEVLLTTISKGIHSVGSLICITV
************************************************************
COL ICCIALVFAAGVASIVIIMVGVLMKDLFEKYQVSRSVLSRTLEDSSTMVLPLIPWGTSGI
N315 ICCIALVFAAGVASIVIIMVGVLMKDLFEKYQVSRSVLSRTLEDSSTMVLPLIPWGTSGI
NCTC8325 ICCIALVFAAGVASIVIIMVGVLMKDLFEKYQVSRSVLSRTLEDSSTMVLPLIPWGTSGI
Newman ICCIALVFAAGVASIVIIMVGVLMKDLFEKYQVSRSVLSRTLEDSSTMVLPLIPWGTSGI
USA300_FPR3757 ICCIALVFAAGVASIVIIMVGVLMKDLFEKYQVSRSVLSRTLEDSSTMVLPLIPWGTSGI
************************************************************
COL YYTNQLHVSVEEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT
N315 YYTNQLHVSVGEFFMWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT
NCTC8325 YYTNQLHVSVEEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT
Newman YYTNQLHVSVEEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT
USA300_FPR3757 YYTNQLHVSVEEFFIWTVPCYLCAIIAIIYGFTGIGIKKSSNSRLT
********** ***:*******************************